DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and K03B8.6

DIOPT Version :9

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_505894.2 Gene:K03B8.6 / 186927 WormBaseID:WBGene00010524 Length:331 Species:Caenorhabditis elegans


Alignment Length:284 Identity:67/284 - (23%)
Similarity:104/284 - (36%) Gaps:84/284 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 QWERNPSKERNRPRERQEMERRRQEQERQEQERQEQED---RRRERERDRQ----LEWERRNRNG 475
            |:|.|..:....|        |...|.:.|..|...:|   |||:.::.||    |..|||:...
 Worm    51 QYEVNSEEVPTLP--------RMNSQTKWEMIRASGQDPTVRRRKNKQHRQQKVVLGRERRDLIL 107

  Fly   476 AREPVTPTANTTPRPTNKPYPTVHRQHHHHNKPRK-----PKP------DSCMTYYDAISI-IRG 528
            |...:|                       |..|:|     ||.      |.|...:|||:. |.|
 Worm   108 APWRIT-----------------------HVVPKKKEAEVPKKAMALSFDVCPEKFDAITKGING 149

  Fly   529 ELFIFRGPYLWRIGTSGLYNGYPTE----IRRHWSALPENLTKVDAVYENKQRQIVFFIGREYYV 589
            ..::|....:::|   ...:|.|.:    |...::..|..:|.  |:..::....:.|.||..|.
 Worm   150 RTYVFARERVYQI---WFEDGLPQKASYLISEFFAGGPRTVTA--ALTNSRSGVTILFDGRTAYR 209

  Fly   590 F------NSVMLAPGFPKPLASLGLPPTLT-HIDASFVWGHNNRTYMTSG------TLYWRIDDY 641
            |      ....||...|:     .||..:| |..::|.|...|:..: ||      ..||.:..:
 Worm   210 FRWNRKHRRFQLAKNTPQ-----DLPRNITIHPLSAFEWADGNQVVL-SGEHFIIYDAYWNLATF 268

  Fly   642 TGQVEL---DYPRDMSIWSGVGYN 662
            ||....   :.|||:   .|:.||
 Worm   269 TGHTRKYFPNLPRDL---LGIVYN 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 Peptidase_M10 143..301 CDD:278824
ZnMc_MMP 143..301 CDD:239805
HX 513..707 CDD:238046 42/177 (24%)
K03B8.6NP_505894.2 HX 134..>265 CDD:295316 34/141 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10201
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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