DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and zmp-5

DIOPT Version :9

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001333542.1 Gene:zmp-5 / 186805 WormBaseID:WBGene00010423 Length:405 Species:Caenorhabditis elegans


Alignment Length:595 Identity:121/595 - (20%)
Similarity:200/595 - (33%) Gaps:232/595 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 SNVRVRRFALQGPKWSRTDLTWSMVNRSM-PDASKVERMVQTALDVWANHSKLTFREVYSD---Q 190
            |..||:|::::|..|.::.:|:.:...|. ...|:.:.:...|...|..|::|.|..|..:   :
 Worm    25 SKSRVKRYSIEGSYWGKSVITYRLKQPSQRMSLSQQKAVFARAFATWEEHTRLWFVAVDDEDEQK 89

  Fly   191 ADIQILFARRAHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGESDDSHGTNFLNVA 255
            |:|.|:||...|.||..|||.|.:|||||:|  ..|||.|||.||.|:    ::.:.|.:...||
 Worm    90 ANIDIVFAAGDHEDGEPFDGKGNILAHAFFP--RYGGDVHFDEDELWS----ANKTKGVDLYAVA 148

  Fly   256 LHELGHSLGLAHSAIPDAVMFPWY-QNNEVAGNLPDDDRYGIQQLYGTKEKTWGPYKPQTTTTTT 319
            :||:||||||.||:...::|.|:| |......:|..||...:::|||...|.             
 Worm   149 VHEIGHSLGLKHSSNHLSIMAPFYKQYTGAVMHLHQDDISAVKRLYGAPVKI------------- 200

  Fly   320 TTTTMRAMIYRADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQEEERRHQEEERRR 384
                                                                             
 Worm   201 ----------------------------------------------------------------- 200

  Fly   385 QVEERQRQEEERWRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQEMERRRQEQERQEQE 449
               .::..|...||.|.                                                
 Worm   201 ---RKKASEHHIWRSEL------------------------------------------------ 214

  Fly   450 RQEQEDRRRERERDRQLEWERRNRNGAREPVTPTANTTPRPTNKPYPTVHRQHHHHNKPRKPKPD 514
                                                     ..||                    
 Worm   215 -----------------------------------------CTKP-------------------- 218

  Fly   515 SCMTYYDAISIIR-GELFIFRGPYLWRIGTSGLYNGYPTEIRRHWSALPENLTKV-------DAV 571
                |.||::.:: |.:..|||...:.:.|:           |.| .||..:.::       :|.
 Worm   219 ----YLDAVTTLKNGTILAFRGKMFFELKTT-----------RKW-LLPRKINRIFPFEGPLEAA 267

  Fly   572 YENKQRQIVFFIGREYYVFNS-VMLAPGFPKPLASLGLPPTLTHIDASFVWGHNNRTYMTSGTLY 635
            ..::...:.||....|:|... ..:..|:||.: |.||..|...|:|:..:..:.:.|....:.:
 Worm   268 TTDRHGNVYFFKKDTYWVMTKHGDMMNGYPKKI-SQGLTDTPDGINAALYYHEDGKPYFFKKSYF 331

  Fly   636 WRIDDYTGQVELDYPRD-MSIWSGVGY--NIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARA 697
            |:...| |:.:| :||. :||:.....  .||||||..:..::.|....||:.:.|.|::.....
 Worm   332 WQYSRY-GKHKL-WPRAIVSIFENQNSPPEIDAAFQLNNTSSFLFHQNKYWKVSGDPMRIEKGFP 394

  Fly   698 KLSARRWMQC 707
            :..:|.|..|
 Worm   395 RSLSRDWFNC 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 Peptidase_M10 143..301 CDD:278824 58/162 (36%)
ZnMc_MMP 143..301 CDD:239805 58/162 (36%)
HX 513..707 CDD:238046 48/205 (23%)
zmp-5NP_001333542.1 ZnMc_MMP 39..195 CDD:239805 58/161 (36%)
HX 213..404 CDD:238046 51/318 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 232 1.000 Inparanoid score I2171
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1075463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10201
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3504
SonicParanoid 1 1.000 - - X44
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.000

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