DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and Mmp2

DIOPT Version :9

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_006530814.1 Gene:Mmp2 / 17390 MGIID:97009 Length:704 Species:Mus musculus


Alignment Length:787 Identity:181/787 - (22%)
Similarity:276/787 - (35%) Gaps:255/787 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 EDIMYNYLMQFDYLPKSDLETGALRTEDQLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCGVG 111
            :::...||..|...||.......      ||:.::.:|.|..:..||::|..|...::|||||  
Mouse    47 KELAVQYLNTFYGCPKESCNLFV------LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCG-- 103

  Fly   112 DRRSADSFSPDNLYHEIGSNVRVRRFALQGPKWSRTDLTWSMVNRSMP-DASKVERMVQTALDVW 175
                    :||         |....|..:.|||.:..:|:.::..:.. |...|:.....||.||
Mouse   104 --------NPD---------VANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARALKVW 151

  Fly   176 ANHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETW--- 237
            ::.:.|.|..::..:|||.|.|.|..|||||.|||...:|||||.||.|.|||:|||.||.|   
Mouse   152 SDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 216

  Fly   238 ----------NFDGESDD----SHGTNFLNVALHELGHSLGLAHSAIPDAVMFPWYQNNEVAGNL 288
                      |.|||...    .:|..:.:..  :.|.|.|           |.|.....   |.
Mouse   217 EGQVVRVKYGNADGEYCKFPFLFNGREYSSCT--DTGRSDG-----------FLWCSTTY---NF 265

  Fly   289 PDDDRYGIQQLYGTKEKTWGPYKPQTTTTT-------------------------------TTTT 322
            ..|.:||           :.|::..|...|                               ..|.
Mouse   266 EKDGKYG-----------FCPHEDPTHGLTHGRADLLHHRLLSSALFMLLSRKLNFVVRLKLLTI 319

  Fly   323 TMRAMIYRAD-KPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQEEERRHQEEERRRQV 386
            |:..|...|| :|..:|:.....:.|:.....                                 
Mouse   320 TLFTMGGNADGQPCKFPFRFQGTSYNSCTTEG--------------------------------- 351

  Fly   387 EERQRQEEERWRQEQERQEEENR----------------------------RRKIEHKSQWERNP 423
                |.:..||....|..:.:.:                            ..|.|..:...||.
Mouse   352 ----RTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRND 412

  Fly   424 SKERNRPRERQEMERRRQEQERQEQERQEQEDRR------------------------RERERD- 463
            .|.........:                  :||:                        .|..:| 
Mouse   413 GKVWCATTTNYD------------------DDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDP 459

  Fly   464 -----------RQLEWERRNRNGAREPVTPT------ANTTPRPTNKPYPTVHRQHHHHNKPRKP 511
                       :.......:..|.:|...|:      ..|.|.||..|.                
Mouse   460 GALMAPIYTYTKNFRLSHDDIKGIQELYGPSPDADTDTGTGPTPTLGPV---------------- 508

  Fly   512 KPDSCM--TYYDAISIIRGELFIFRGPYLWRIGTSGLYNGYPTEIRRHWSALPENLTKVDAVYEN 574
            .|:.|.  ..:|.|:.||||:|.|:..::||..|.......|..:...|..|||   |:|||||.
Mouse   509 TPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPE---KIDAVYEA 570

  Fly   575 KQRQ-IVFFIGREYYVFNSVMLAPGFPKPLASLGLPPTLTHIDASFVWGHNNRTYMTSGTLYWRI 638
            .|.: .|||.|.||:|:::..|..|:||||.||||||.:..:||:|.|..|.:||:.:|..:||.
Mouse   571 PQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYIFAGDKFWRY 635

  Fly   639 DDYTGQVELDYPRDMS-IWSGVGYNIDAAFQYL-DGKTYFFKNLGYWEFNDDRMK-VAHARAKLS 700
            ::...:::..:|:.:: .|:.:..|:||..... .|.:||||...|.:..:..:| |.....|..
Mouse   636 NEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSD 700

  Fly   701 ARRWMQC 707
               |:.|
Mouse   701 ---WLGC 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 Peptidase_M10 143..301 CDD:278824 56/175 (32%)
ZnMc_MMP 143..301 CDD:239805 56/175 (32%)
HX 513..707 CDD:238046 69/199 (35%)
Mmp2XP_006530814.1 PG_binding_1 <70..97 CDD:366659 6/26 (23%)
Peptidase_M10 118..>219 CDD:334067 33/101 (33%)
FN2 226..274 CDD:128373 17/64 (27%)
FN2 326..374 CDD:128373 6/48 (13%)
FN2 384..432 CDD:128373 9/75 (12%)
ZnMc <408..489 CDD:214576 13/150 (9%)
HX 510..704 CDD:238046 68/199 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1075463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10201
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X44
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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