DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and LOC116408899

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_031753180.1 Gene:LOC116408899 / 116408899 XenbaseID:XB-GENE-29094799 Length:216 Species:Xenopus tropicalis


Alignment Length:233 Identity:100/233 - (42%)
Similarity:132/233 - (56%) Gaps:34/233 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 EAIRSLQSFGNITVTGEIDSATARLIQKPRCGVGDRRSADSFSPDNLYHEIGSNVRVRRFALQGP 142
            |.|:.:|.|..:||:|::|..|..:::.||||:.|......| |.|                  |
 Frog    12 EKIKEMQKFFRMTVSGKLDRDTLAMMKAPRCGMPDVSEYSKF-PGN------------------P 57

  Fly   143 KWSRTDLTWSMVNRSMPD--ASKVERMVQTALDVWANHSKLTFREVYSDQADIQILFARRAHGDG 205
            :|..|.||:.:.|.: ||  ..||:..:|.||.:|::.:.||||::.|..|||.|.||:|:|||.
 Frog    58 RWKNTKLTYRIQNYT-PDLPRQKVDEAIQRALKLWSDVAPLTFRKLTSGTADIMIKFAKRSHGDF 121

  Fly   206 YKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGESDDSHGTNFLNVALHELGHSLGLAHSAI 270
            ..||||..||||||.||.|.|||||||.||.|     ::.:...|...||.||.||||||.||..
 Frog   122 DPFDGPHGVLAHAFAPGNGIGGDAHFDEDEKW-----TNSAAEYNLFLVAAHEFGHSLGLGHSRD 181

  Fly   271 PDAVMFPWYQ--NNEVAGN--LPDDDRYGIQQLYGTKE 304
            |:|:|:|.|.  |   .||  ||.||..|||.:||.|:
 Frog   182 PNALMYPTYHYWN---TGNFRLPQDDVKGIQSIYGRKK 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223 9/24 (38%)
Peptidase_M10 143..301 CDD:425668 79/163 (48%)
HX 513..707 CDD:238046
LOC116408899XP_031753180.1 PG_binding_1 <8..37 CDD:460223 9/24 (38%)
Peptidase_M10 58..213 CDD:425668 79/163 (48%)
Blue background indicates that the domain is not in the aligned region.

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