DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and LOC101883213

DIOPT Version :9

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_021335120.1 Gene:LOC101883213 / 101883213 -ID:- Length:467 Species:Danio rerio


Alignment Length:673 Identity:150/673 - (22%)
Similarity:237/673 - (35%) Gaps:262/673 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 YLMQF-DYLPKSDLETGALRTE---DQLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCGVGDR 113
            ||::| ::.|    |.|..|..   |..:..:|.:|.|..:..:||:|..|.|.:::.|||:.| 
Zfish    39 YLVKFYNHKP----ENGRRRRTAGLDPFQAKLREMQHFFGLEESGEVDPQTIRAMRRARCGLSD- 98

  Fly   114 RSADSFSPDNLYHEIGSNVRVRRFALQGPKWSRTDLTWSMVN-RSMPDASKVERMVQTALDVWAN 177
                                |.||. :..:|:...||:.:.. .|...:::|:...:.|..:||.
Zfish    99 --------------------VERFG-KTMRWTNKTLTYKISKFSSKMSSARVKTAFRQAWQLWAQ 142

  Fly   178 HSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGE 242
            .:.|.||......|||.|.|..:.|.||..|||.|.:|||||.||.|.|||.|||.:|||..:|.
Zfish   143 AAPLKFRRKRRSDADIVISFNNKDHNDGSPFDGEGGILAHAFSPGPGIGGDVHFDDEETWTTNGS 207

  Fly   243 SDDSHGTNFLNVALHELGHSLGLAHSAIPDAVMFPWYQ-NNEVAGNLPDDDRYGIQQLYGTKEKT 306
                 |.|.|.||:||.||:|||:||:.|.|:|||.|. .......|...|...|:::||     
Zfish   208 -----GYNLLPVAVHEFGHALGLSHSSDPGAIMFPAYNFGLHSVLQLSYQDVKDIKEMYG----- 262

  Fly   307 WGPYKPQTTTTTTTTTTMRAMIYRADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQ 371
                                                                             
Zfish   263 ----------------------------------------------------------------- 262

  Fly   372 EEERRHQEEERRRQVEERQRQEEERWRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQEM 436
                                                            ||:.|.:...|:     
Zfish   263 ------------------------------------------------ERSTSPDLLPPK----- 274

  Fly   437 ERRRQEQERQEQERQEQEDRRRERERDRQLEWERRNRNGAREPVTPTANTTPRPTNKPYPTVHRQ 501
                                                                             
Zfish   275 ----------------------------------------------------------------- 274

  Fly   502 HHHHNKPRKPKPDSC--MTYYDAISIIRGELFIFRGPYLWRIGTSGLYNGYPT--EIR-----RH 557
                      .||.|  ...:||::.::.||..|:..::||:        :|:  |||     ..
Zfish   275 ----------TPDRCDPDLSFDAVTGMQQELVFFKDRFIWRV--------HPSFDEIRITLITSL 321

  Fly   558 WSALPENLTKVDAVYEN-KQRQIVFFIGREYY-VFNSVMLAPGFPKPLASLGLPPTLTHIDASFV 620
            |:.:|.:   :||.||| .:..|:.|.|.:|: :.:|:.:..|||:.::..|.|.::..|||...
Zfish   322 WTEIPAD---IDAAYENTNKNSILVFKGSQYWEMLSSLKVKEGFPRNISDFGFPSSVKSIDAVLS 383

  Fly   621 WGHNNRTYMTSGTLYWRIDDYTGQVELDYPRDMSI-WSGVGYNIDAAFQYLDGKTYFFKNLGYWE 684
            :...:.|....|...||.::..||:...:|:.::: |.|:...:||...: ||:.|||......|
Zfish   384 FRETHLTDFFIGGECWRFNEDAGQMMEGFPKPIALEWPGIKSPVDAVVAH-DGRVYFFIGPQQLE 447

  Fly   685 FNDDRMKVAHARAKLSARRWMQC 707
            |.....:|..   :|.|..|::|
Zfish   448 FTPPIRRVTQ---RLPANTWLRC 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 Peptidase_M10 143..301 CDD:278824 64/159 (40%)
ZnMc_MMP 143..301 CDD:239805 64/159 (40%)
HX 513..707 CDD:238046 56/205 (27%)
LOC101883213XP_021335120.1 PG_binding_1 <63..89 CDD:307564 8/25 (32%)
Peptidase_M10 107..262 CDD:306839 64/159 (40%)
HX 276..467 CDD:238046 56/205 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1075463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10201
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X44
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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