DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and LOC100493912

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_031750963.1 Gene:LOC100493912 / 100493912 XenbaseID:XB-GENE-29081943 Length:861 Species:Xenopus tropicalis


Alignment Length:700 Identity:138/700 - (19%)
Similarity:197/700 - (28%) Gaps:326/700 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 FDYLPKSDLETGALRTEDQLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCGVGDRR------- 114
            ||.:..:|||   |....:...|:|..|....:.|||.:|:||...:..|||||.|.|       
 Frog   339 FDSVSPTDLE---LTLNPRFNGALRRFQEANKLEVTGRLDAATIMAMNVPRCGVPDHRVPEGVGA 400

  Fly   115 -------------SADSFSPD---NLYHEIGSNVRVRRFALQGP--------------------K 143
                         |.:|.|.:   :.|.|.....:.|..||..|                    .
 Frog   401 QPEDPEENGSTTLSINSESAEENRDTYEESAEEYQERGQALGLPAKRQVRRKRSQLLKAGAKRAA 465

  Fly   144 WSRTDLTWSMVNR--SMPDASKVER-MVQTALDVWANHSKLTFREVYSDQA---DIQILFARRAH 202
            :|:..|.|.::..  |:..:.:.:| :::.|..:|:....|.|:|..|..|   ||::.|..|.|
 Frog   466 FSKLTLKWRLLGEGYSVWLSKEQQRYILRLAFRMWSEVVPLNFQEDLSSPAQLIDIKLGFGTRRH 530

  Fly   203 -GDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGESDDSHGTNFLNVALHELGHSLGLA 266
             |....||..|:..|||:     :.||.||:.||.:   ...:..||.:.|.||:||:||.|||:
 Frog   531 LGCSQLFDDMGREFAHAW-----QLGDIHFNDDEHF---VPPNSEHGISLLKVAVHEIGHVLGLS 587

  Fly   267 HSAIPDAVMFPWYQNNEVAGNLPDDDRYGIQQLYGTKEKTWGPYKPQTTTTTTTTTTMRAMIYRA 331
            |.....:||.|.|........|...||..||::||   |..|.:.                    
 Frog   588 HMNHLGSVMQPNYIPANGKMELGWTDRRAIQKIYG---KCSGRFS-------------------- 629

  Fly   332 DKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQEEERRHQEEERRRQVEERQRQEEER 396
               ..:.|                                    .|||.:               
 Frog   630 ---TVFDW------------------------------------VHQEPD--------------- 640

  Fly   397 WRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQEMERRRQEQERQEQERQEQEDRRRERE 461
                                                                             
 Frog   641 ----------------------------------------------------------------- 640

  Fly   462 RDRQLEWERRNRNGAREPVTPTANTTPRPTNKPYPTVHRQHHHHNKPRKPKPDSCMTYYDAISII 526
                                               .:..|..|:|           ||:      
 Frog   641 -----------------------------------DLGHQVSHYN-----------TYF------ 653

  Fly   527 RGELFIFRGPYLWRIGTSG--LYNGYPTEIRRHWSALPENLTKVDAVYENKQRQIVFFIGREYYV 589
                  ||..:.||...|.  .:.|||.|::..|..:|.  ..:||                   
 Frog   654 ------FRRSWYWRYENSSNRTWYGYPQELKVGWEGIPH--ADIDA------------------- 691

  Fly   590 FNSVMLAPGFPKPLASLGLPPTLTHIDASFVWGHNNR-TYMTSGTLYWRIDDYT---------GQ 644
                                  ..|.     |..|.| |:...|.||||.||..         |.
 Frog   692 ----------------------FLHF-----WTRNKRFTFFFKGKLYWRYDDQNDRAYRQDPEGH 729

  Fly   645 VELDYPRDMSI-WSGVGYNIDAAF-QYLDGKTYFFKNLGYWEFNDDRMKV 692
            :   |||.:|. :.|:|..||..| ...|...|||.......|..:..||
 Frog   730 I---YPRLISEGFPGIGGPIDTVFYDQRDHNIYFFHGRNVTAFGVESQKV 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223 15/45 (33%)
Peptidase_M10 143..301 CDD:425668 52/164 (32%)
HX 513..707 CDD:238046 43/193 (22%)
LOC100493912XP_031750963.1 Nnr1 <78..297 CDD:439832
PG_binding_1 <358..382 CDD:460223 9/23 (39%)
ZnMc_MMP 466..622 CDD:239805 52/163 (32%)
HX 651..822 CDD:413329 43/188 (23%)
Blue background indicates that the domain is not in the aligned region.

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