DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and mmp24

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_031750429.1 Gene:mmp24 / 100492405 XenbaseID:XB-GENE-1009940 Length:633 Species:Xenopus tropicalis


Alignment Length:734 Identity:203/734 - (27%)
Similarity:301/734 - (41%) Gaps:212/734 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFAQSMCIQELSLPP----------EGSHSTAATRSK---KAKTAISEDIMY--NYLMQFDYLPK 62
            |.|.|....||.||.          :.|..|:|..|:   ::.|:|::...:  .:|..:.||..
 Frog    17 LAAASWLASELQLPATELPFSAAELQLSAVTSAWSSRVFARSGTSITDGTPHVPRWLKTYGYLLP 81

  Fly    63 SDLETGALRTEDQLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCGVGDRRSADSFSPDNLYHE 127
            .|:...||::...::.|:.::|.|..|.||||:|..|...::||||||.|            :..
 Frog    82 YDIRISALQSGKAMQSAVSAMQQFYGIPVTGELDQMTIEWMKKPRCGVPD------------HPH 134

  Fly   128 IGSNVRVRRFALQGPKWSRTDLTWSMVNRSMPDASKVE--RMVQTALDVWANHSKLTFREV-YSD 189
            :....|.:|:||.|.||.:..:|:|:.|.: |...:::  :.::.|.|||...:.|||.|: ||:
 Frog   135 LSHRRRNKRYALTGQKWRQKHITYSIHNYT-PKVGELDTRKAIRQAFDVWQKVTPLTFEEIPYSE 198

  Fly   190 ------QADIQILFARRAHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGESDDSHG 248
                  :|||.|.||...|||...|||.|..||||::||.|.|||.|||:||.|.....:.|  |
 Frog   199 IKNERKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNSNHD--G 261

  Fly   249 TNFLNVALHELGHSLGLAHSAIPDAVMFPWYQNNEVAG-NLPDDDRYGIQQLYGTKEKTWGPYKP 312
            .:...||:|||||:|||.||..|.|:|.|:||..|... .||.||..|||::||...:|..|.:|
 Frog   262 NDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIYGPPAETMEPTRP 326

  Fly   313 QTTTTTTTTTTMRAMIYRADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQEEERRH 377
            ..|.                                                       ...|.|
 Frog   327 LPTL-------------------------------------------------------PPRRIH 336

  Fly   378 QEEERRRQVEERQRQEEERWRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQEMERRRQE 442
            ...||:.                                   ||.|     ||            
 Frog   337 STSERKH-----------------------------------ERQP-----RP------------ 349

  Fly   443 QERQEQERQEQEDRRRERERDRQLEWERRNRNGAREPVTPTANTTPRPT--NKPYPTVHRQHHHH 505
                                                         |||.  :||..|..|     
 Frog   350 ---------------------------------------------PRPPLGDKPPSTGSR----- 364

  Fly   506 NKPRKPKPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLYNGYPTEIRRHWSALPENLTKVDA 570
                   |:.|...::.:::.|||:|:|:..:.||:..:.:..|||.:|.:.|..||   .|:||
 Frog   365 -------PNICDGNFNTVALFRGEMFVFKDRWFWRLRNNKVQEGYPMQIEQFWKGLP---PKIDA 419

  Fly   571 VYENKQRQIVFFIGREYYVFNSVMLAPGFPKPLASLGLPPTLTHIDASFVWGHNNRTYMTSGTLY 635
            .||....:.|||.|.:|:||..|...||:|..|..||.......||.:..|...::||...|..|
 Frog   420 AYERSDGKFVFFKGDKYWVFKEVTAEPGYPHSLVELGSCLPREGIDTALRWETFSKTYFFKGDRY 484

  Fly   636 WRIDDYTGQVELDYPRDMSIWSGVGYNIDAAFQYLDGK-TYFFKNLGYWEFNDDRMKVAHARAKL 699
            ||.::.....:..||:.::||.|:..:...||...:|. |||:|...||:|::.|:.|.....:.
 Frog   485 WRYNEEKRAADPGYPKPITIWKGIPESPQGAFVSKEGSYTYFYKGREYWKFDNQRLTVEPGYPRS 549

  Fly   700 SARRWMQCARSANEVDDEQ 718
            ..:.||.|  :..|||:.:
 Frog   550 IVKDWMGC--NQKEVDNSK 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223 16/50 (32%)
Peptidase_M10 143..301 CDD:425668 73/167 (44%)
HX 513..707 CDD:238046 63/194 (32%)
mmp24XP_031750429.1 PG_binding_1 71..122 CDD:460223 16/50 (32%)
Peptidase_M10 150..315 CDD:425668 73/167 (44%)
HX 365..557 CDD:238046 63/194 (32%)
DUF3377 563..633 CDD:463374 1/4 (25%)

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