DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and LOC100489842

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_002935198.2 Gene:LOC100489842 / 100489842 XenbaseID:XB-GENE-29079911 Length:364 Species:Xenopus tropicalis


Alignment Length:200 Identity:68/200 - (34%)
Similarity:94/200 - (47%) Gaps:32/200 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 EIGSN--------VRVRRFALQ--GPKWSRTDLTWSMVNRSMPDA---SKVERMVQTALDVWANH 178
            |.|:|        .|.:|:.:.  |.||...:||:.:|  ..|:.   ...||.:..|..:|:..
 Frog    46 ECGTNCSFRSSILTRRKRYTINPLGYKWDHLNLTYKIV--QFPNTLNKDDTERALALAFRMWSKV 108

  Fly   179 SKLTFREVYSDQ-ADIQILFARRAHGDGYK------FDGPGQVLAHAFYPGEGRGGDAHFDADET 236
            |.|||:.|.|.| :|::|.|....|.|.:.      |||....|||||.|..   |:.|||..|.
 Frog   109 SSLTFQRVQSHQVSDLRIGFYTFNHSDCWGSPLHPCFDGLNGELAHAFLPPR---GEIHFDNHEF 170

  Fly   237 WNFDGESDDS--HG---TNFLNVALHELGHSLGLAHSAIPDAVMFPWYQNNEVAGNLPDDDRYGI 296
            |.. |.|..|  .|   .:.:.||.||:||:|||.||:...|:|.|......:. ::..||...|
 Frog   171 WVL-GPSRFSWKQGVWYNDLVQVAAHEIGHALGLWHSSNVTALMHPNATYTRIR-HVTKDDIMAI 233

  Fly   297 QQLYG 301
            |.|||
 Frog   234 QSLYG 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223
Peptidase_M10 143..301 CDD:425668 60/172 (35%)
HX 513..707 CDD:238046
LOC100489842XP_002935198.2 ZnMc_MMP 72..238 CDD:239805 60/172 (35%)
Ig_2 286..364 CDD:464026
Blue background indicates that the domain is not in the aligned region.

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