DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and LOC100489571

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_002934968.2 Gene:LOC100489571 / 100489571 XenbaseID:XB-GENE-29079787 Length:466 Species:Xenopus tropicalis


Alignment Length:673 Identity:174/673 - (25%)
Similarity:239/673 - (35%) Gaps:252/673 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 IMYNYLMQFDYLPKSDLETGALRTEDQLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCGVGDR 113
            |...:|.:|..|..:.:.....:..:...|.||.:|.|..:.|||.:|..|..::|:||||:.|.
 Frog    32 IAEEFLKKFFNLQTNGIRQSRKKGSNAFSEKIREMQDFYGLEVTGTLDQETIDVMQQPRCGISDV 96

  Fly   114 RSADSFSPDNLYHEIGSNVRVRRFALQGPKWSRTDLTWSMVNRSMPDASK--VERMVQTALDVWA 176
            .:..:| |.|                  |.|.:.|||:.::|.: ||..|  |:|.:|.|..||:
 Frog    97 GNFATF-PGN------------------PVWKKKDLTYRILNYT-PDMPKDEVDRAIQKAFKVWS 141

  Fly   177 NHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDG 241
            :.:.|||..:....|||.|.||.:.|.|.|.||||...|||||.||...|||||||.||.|    
 Frog   142 DVTPLTFTRILDGVADIDISFAAQVHNDFYPFDGPYGTLAHAFAPGNNIGGDAHFDEDENW---- 202

  Fly   242 ESDDSHGTNFLNVALHELGHSLGLAHSAIPDAVMFPWYQNNEV-AGNLPDDDRYGIQQLYGTKEK 305
             :..|.|.|...||.||.||||||.||..|:|:|:|.|...:. ...||.||..|||.|||..||
 Frog   203 -TSGSVGFNLFLVAAHEFGHSLGLYHSNDPNALMYPTYHYVDTNTYQLPQDDINGIQSLYGASEK 266

  Fly   306 TWGPYKPQTTTTTTTTTTMRAMIYRADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRR 370
               |.||.|                                                        
 Frog   267 ---PAKPST-------------------------------------------------------- 272

  Fly   371 QEEERRHQEEERRRQVEERQRQEEERWRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQE 435
                                                                             
 Frog   273 ----------------------------------------------------------------- 272

  Fly   436 MERRRQEQERQEQERQEQEDRRRERERDRQLEWERRNRNGAREPVTPTANTTPRPTNKPYPTVHR 500
                                                       |:.||  |.|       |.:  
 Frog   273 -------------------------------------------PINPT--TCP-------PNI-- 283

  Fly   501 QHHHHNKPRKPKPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLYNGYPT-------EIRRHW 558
                              .:|||:.:|||:..|:....||        ..|.       |||..|
 Frog   284 ------------------TFDAITTLRGEILFFKHRSFWR--------KIPNKSEIEQHEIRTFW 322

  Fly   559 SALPENLTKVDAVYENKQR-QIVFFIGREYYVFNSVMLAPGFPKPLASLGLPPTLTHIDASFVWG 622
            ..||   |.:.|.|||::: |:..|.|.:|:......:..||||.:..||.|.|:..|||:....
 Frog   323 KTLP---TGIQAAYENQEKDQVFLFKGTKYWALKGFDIEEGFPKSIYQLGFPQTVKKIDAAVHVE 384

  Fly   623 HNNRTYMTSGTLYWRIDDYTGQVELDYPRD-MSIWSGVGYNIDAAFQYLDGKTYFFKNLGYWEFN 686
            ...:||......||..|:...|::.|.|:. ::.:.|||..:.|.|| .:|..|||.....:||:
 Frog   385 ETRKTYFFVNNQYWSYDERRSQMDKDSPQSIINGFPGVGNKVQAVFQ-SNGNLYFFNGNRQYEFS 448

  Fly   687 DDRMKVAHARA--KLSARRWMQC 707
                 :|:.|.  .|....|:.|
 Frog   449 -----IANKRVLRLLKYTSWLNC 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223 13/50 (26%)
Peptidase_M10 143..301 CDD:425668 75/160 (47%)
HX 513..707 CDD:238046 60/204 (29%)
LOC100489571XP_002934968.2 PG_binding_1 <61..86 CDD:460223 10/24 (42%)
Peptidase_M10 108..262 CDD:425668 75/159 (47%)
HX 276..466 CDD:238046 65/235 (28%)

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