DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and mmp21

DIOPT Version :9

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001304682.1 Gene:mmp21 / 100003089 ZFINID:ZDB-GENE-100226-2 Length:599 Species:Danio rerio


Alignment Length:734 Identity:140/734 - (19%)
Similarity:227/734 - (30%) Gaps:287/734 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YVLATLLALFAQSMCIQELSLPPEGSHSTAATRSKKAKTAISEDIMYNYLMQFDYL--------- 60
            :::.|.:.:.|:.:....       .||.......:|:.....|....:|.::.::         
Zfish     9 FIIQTFIFITAEKIFHSR-------DHSDVLNNIHQAELITDTDTAQRFLSKYGFIKAAGSEESQ 66

  Fly    61 ---PKSDLE-------------TGALRTEDQLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCG 109
               ...||:             :|:..::.|...|:|..|...::.|||..|.||...:.|||||
Zfish    67 LSESSGDLDFSLSLDLHEGGTTSGSSSSDLQFVSALRDFQRLSDLPVTGVFDDATKAAMNKPRCG 131

  Fly   110 VGD--------------RRSADSFSPDNLYHEIGSNVRVRRF---ALQGPK--------W----- 144
            |.|              |....:.:..:..||..:.||.:|.   .|:..|        |     
Zfish   132 VMDDDQELKDVTGSNSTRNHIRTSTNTSHNHEHQAPVRKKRHLSALLKNTKLQKRDVSEWTGHMA 196

  Fly   145 -SRTDLTWSMVNRSMPDASKVER---MVQTALDVWANHSKLTF-REVYS--DQADIQILFARRAH 202
             |::.|.|.::.........::.   :.:.|..:|:..|.|.| .:::|  ...||::.|....|
Zfish   197 FSKSVLKWRLIGEGYSSQLSIQEQKYIFRLAFRMWSEISPLQFIEDLHSPLGNIDIRLGFGTGRH 261

  Fly   203 -GDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGESDDSHGTNFLNVALHELGHSLGLA 266
             |...:|||.|:..|||::.     ||.|||.||.:..   .:...|.:.|.||:||:||.|||.
Zfish   262 LGCSQRFDGAGREFAHAWFL-----GDIHFDDDEHFTV---PNTGSGISLLKVAVHEIGHVLGLP 318

  Fly   267 HSAIPDAVMFPWYQNNEVAGNLPDD--------DRYGIQQLYGT-------------KEKTWGPY 310
            |...|.::|.|.|        ||.|        ||..||:|||.             ||:|  ||
Zfish   319 HIYRPGSIMQPSY--------LPQDAGFEIDWMDRKSIQRLYGVCMGRFSTVFDWIRKEQT--PY 373

  Fly   311 KPQTTTTTTTTTTMRAMIYRADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQEEER 375
                     ....:|...|......||.:.|                                  
Zfish   374 ---------GEVVVRFNTYFMRDGLYWLYEN---------------------------------- 395

  Fly   376 RHQEEERRRQVEERQRQEEERWRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQEMERRR 440
                                                                             
Zfish   396 ----------------------------------------------------------------- 395

  Fly   441 QEQERQEQERQEQEDRRRERERDRQLEWERRNRNGAREPVTPTANTTPRPTNKPYPTVHRQHHHH 505
                                         |.||....:||.........|:......||..:   
Zfish   396 -----------------------------RNNRTRYGDPVAVQVGWHGLPSGGVDAYVHVWN--- 428

  Fly   506 NKPRKPKPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLY--------NGYPTEIRRHWSALP 562
               ||.         ||:       :.|:|...||..:...:        ..||..|...:..:.
Zfish   429 ---RKT---------DAV-------YFFKGMQYWRYDSENDHVFSHAPDGRSYPRLISEDFPGVS 474

  Fly   563 ENLTKVDAVYENKQRQIVFFIGREYYVFNSVM--LAPGFPKPLASL------GLPPTLTHIDASF 619
            ..|.  .|.|:.:...|.||.|.:.:.|:..|  ||...|:.:..:      |..| :..:||::
Zfish   475 GPLD--TAYYDRRDAHIYFFKGSQVFRFDVRMRRLASSSPQEMTEVFPAIVSGDHP-VRSLDAAY 536

  Fly   620 VWGHNNRTYMTSGTLYWRI 638
            ....:|..::..|:|:||:
Zfish   537 FSYTHNTVFLLKGSLFWRV 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 Peptidase_M10 143..301 CDD:278824 54/186 (29%)
ZnMc_MMP 143..301 CDD:239805 54/186 (29%)
HX 513..707 CDD:238046 30/142 (21%)
mmp21NP_001304682.1 PG_binding_1 <99..125 CDD:279773 9/25 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..170 4/28 (14%)
Peptidase_M10 196..353 CDD:278824 52/172 (30%)
ZnMc_MMP 197..353 CDD:239805 52/171 (30%)
Hemopexin 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01011 356..415 15/197 (8%)
HX 382..564 CDD:295316 44/327 (13%)
Hemopexin 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01011 417..473 13/77 (17%)
Hemopexin 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU01011 474..522 12/49 (24%)
Hemopexin 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01011 529..585 7/27 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1075463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10201
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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