DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12926 and Clvs1

DIOPT Version :9

Sequence 1:NP_610510.2 Gene:CG12926 / 35996 FlyBaseID:FBgn0033437 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001102439.1 Gene:Clvs1 / 366311 RGDID:1564200 Length:354 Species:Rattus norvegicus


Alignment Length:302 Identity:80/302 - (26%)
Similarity:129/302 - (42%) Gaps:63/302 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSPELAKKAHDELGEIPDRIDEDIETLRTWISKQPHLK-ARQDAQFLVAFLRGCKYSLEKTKLKL 75
            |||:..:||..||.|.||.:.:||:.:|..|..:|.:. .|.|..|::.|||..|:........|
  Rat    30 LSPDTIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQADAFRLL 94

  Fly    76 DNFYAMRGAVPELYKNRIVGEKQLSILDTGCLLRLPQPLQADGPRI-------------HISRYG 127
            ..::..|....:::||                      .:||.|.|             :...||
  Rat    95 AQYFQYRQLNLDMFKN----------------------FKADDPGIKRALIDGFPGVLENRDHYG 137

  Fly   128 Q---------YDSKKYSIAEVVQVNTMLGEIQIREDDNAMISGFVEIIDMKGVGAGHLFQFDAV- 182
            :         :|..:.|..::::...:..|:.| ||....|:||:.|||...      |.|... 
  Rat   138 RKILLLFAANWDQSRNSFTDILRAILLSLEVLI-EDPELQINGFILIIDWSN------FSFKQAS 195

  Fly   183 ----LVKKLAVLG-DKAYPYRPKGFHFVNAPSSAEKFMSIAKSLMSEKIRKRFHIH-SKLDSLYK 241
                .:.|||:.| ..::|.|..|.||||.|.......::.|..:.:|.|||..:| :.|:||::
  Rat   196 KLTPSILKLAIEGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQ 260

  Fly   242 YVPKECLPAEYGGSNGTIQDVVSTWRTKLLAYKPFFEEEASY 283
            .:..|.||:|:||:.....  :.||...||.  |.:.:|..|
  Rat   261 LIHPEFLPSEFGGTLPPYD--MGTWARTLLG--PDYSDENDY 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12926NP_610510.2 CRAL_TRIO_N 32..77 CDD:215024 13/45 (29%)
SEC14 117..254 CDD:238099 44/165 (27%)
Clvs1NP_001102439.1 CRAL_TRIO_N 51..97 CDD:215024 13/45 (29%)
CRAL_TRIO 125..274 CDD:395525 42/155 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339604
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X106
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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