DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12926 and Rlbp1

DIOPT Version :10

Sequence 1:NP_610510.2 Gene:CG12926 / 35996 FlyBaseID:FBgn0033437 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_065624.1 Gene:Rlbp1 / 19771 MGIID:97930 Length:317 Species:Mus musculus


Alignment Length:265 Identity:62/265 - (23%)
Similarity:118/265 - (44%) Gaps:45/265 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KKAHDELGEIPDRIDEDIETLRTWISKQ------------PHLKARQDAQFLVAFLRGCKYSLEK 70
            :||.|||.|..:..:|.:..|:..:..|            ..::|| |:.||:.|:|..|:.:.:
Mouse    46 QKAKDELNEKEETREEAVRELQELVQAQAASGEELALAVAERVQAR-DSAFLLRFIRARKFDVGR 109

  Fly    71 TKLKLDNFYAMRGAVPELYKNRIVGEKQLSILDTGCLLRLPQPLQADGPRIHISR--YGQ----- 128
            ....|..:...|...|||:.:       ||:....|      .::|..|.:..||  ||:     
Mouse   110 AYELLKGYVNFRLQYPELFDS-------LSMEALRC------TIEAGYPGVLSSRDKYGRVVMLF 161

  Fly   129 ----YDSKKYSIAEVVQVNTMLGEIQIREDDNAMISGFVEIIDMKGV---GAGHLFQFDAVLVKK 186
                :..::.:..|::|....:.| ::.|::...|:||..:.:.||.   .|..|...|   :||
Mouse   162 NIENWHCEEVTFDEILQAYCFILE-KLLENEETQINGFCIVENFKGFTMQQAAGLRPSD---LKK 222

  Fly   187 LAVLGDKAYPYRPKGFHFVNAPSSAEKFMSIAKSLMSEKIRKRFHIH-SKLDSLYKYVPKECLPA 250
            :..:...::|.|.|..||::.|.......::.|..:..|:.:|..:| ..||..::.:.:..|||
Mouse   223 MVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPA 287

  Fly   251 EYGGS 255
            ::||:
Mouse   288 DFGGT 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12926NP_610510.2 CRAL_TRIO_N 32..77 CDD:215024 12/56 (21%)
CRAL_TRIO 117..254 CDD:459890 34/151 (23%)
Rlbp1NP_065624.1 CRAL_TRIO_N 60..117 CDD:215024 12/57 (21%)
SEC14 141..292 CDD:469559 36/154 (23%)

Return to query results.
Submit another query.