DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12926 and ctg-2

DIOPT Version :9

Sequence 1:NP_610510.2 Gene:CG12926 / 35996 FlyBaseID:FBgn0033437 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001254156.1 Gene:ctg-2 / 174360 WormBaseID:WBGene00011756 Length:408 Species:Caenorhabditis elegans


Alignment Length:319 Identity:68/319 - (21%)
Similarity:118/319 - (36%) Gaps:81/319 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SNSIRSLSPELAKKAHDELGEIPDRIDEDIETLR---TWISK----QPHLKARQDAQFLVAFLRG 63
            :.|.|.|..||.|:.|.|| |:....|:|...:|   .|..|    .|.:|....|...:...:.
 Worm    21 TESDRKLLDELRKRIHKEL-ELVKEYDDDFSLMRWLIGWDRKIDVVVPKIKFSLRAIHALGLDQE 84

  Fly    64 CKYSLEKTKLKLDNFYAMRGAVPELY----------KNRIVGEKQLSILDTGCLLRLPQPLQADG 118
            ...:|||...|.|:.     :||..|          :|.:|..:.:..||...|  :|....:|.
 Worm    85 DLSTLEKVAQKCDDC-----SVPLRYLPGSLIGLDHENNVVSLQMIGHLDAAGL--MPATRNSDL 142

  Fly   119 PRIHISRYGQYDSKKYSIAEVVQVNTMLGEIQIREDDNAMISGFVEIIDMKGVGAGHLFQFDAVL 183
            .|:.|:     :|:     .|:|:      |:..|.:.....|...|.|:.|:.   :.|.|...
 Worm   143 YRMRIA-----ESE-----GVMQI------IRKMEKEQGKPLGTSVIFDLDGLS---MVQIDLAA 188

  Fly   184 VKKLAVL---GDKAYPYRPKGFHFVNAPSSAEKFMSIAKSLMSEKIRKRFHIHSKL------DSL 239
            :|.:..:   ..:.:|...:....||.|:    |:.:..|::|..:.|:.....|:      ..|
 Worm   189 LKVVTTMLSQLQEMFPDVIRKIFIVNTPT----FIQVLWSMISPCLAKQTQQKVKILGNDWKQHL 249

  Fly   240 YKYVPKECLPAEYGGSNGTIQDVVSTWRTKLLAYKPFFEEEASYGTNEKLRRGQPVSAE 298
            .:.:.:|.|...:||:.                     :.|..||   .:|.|..:.||
 Worm   250 KENIGEEVLFERWGGTR---------------------KAETEYG---NVRMGGKIPAE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12926NP_610510.2 CRAL_TRIO_N 32..77 CDD:215024 12/51 (24%)
SEC14 117..254 CDD:238099 27/145 (19%)
ctg-2NP_001254156.1 SEC14 98..267 CDD:214706 38/219 (17%)
EMP24_GP25L 331..>405 CDD:279450
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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