DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstT1 and gdap1

DIOPT Version :9

Sequence 1:	NP_610509.2	Gene:	GstT1 / 35995	FlyBaseID:	FBgn0050000	Length:	228	Species:	Drosophila melanogaster
Sequence 2:	NP_001018511.1	Gene:	gdap1 / 553702	ZFINID:	ZDB-GENE-050522-424	Length:	362	Species:	Danio rerio

Alignment Length:	108	Identity:	31/108 - (28%)
Similarity:	45/108 - (41%)	Gaps:	12/108 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 SKAIKYYY--DFLSQPSRALWIAMKLGKTPFEDCPVALRKQEQLTDEYRSINRFQKVPAIVDGKF 64
            ||.|.|::  .|.||..| |.||.|  ....||..|:|...|.....:..:|...:||.:|....
Zfish    38 SKLILYHWTQSFSSQKVR-LAIAEK--GLQCEDYDVSLPLSEHNEPWFMRLNPTGEVPVLVHDNH 99

  Fly    65 QLGESVSIVRYLADKGVFSEQLYPKTLEERA-----RVDEFLE 102
            .:.:...|:.||...  |.::..||.:.|..     ||..:.|
Zfish   100 VICDPTQIMDYLEQN--FCDEQTPKLIPEEGSTYYHRVQHYRE 140

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
GstT1	NP_610509.2	GstA	5..204	CDD:223698	29/105 (28%)
		GST_N_Theta	5..80	CDD:239348	22/76 (29%)
		GST_C_Theta	93..218	CDD:198292	4/15 (27%)
gdap1	NP_001018511.1	GstA	40..307	CDD:223698	29/106 (27%)
		GST_N_GDAP1	40..112	CDD:239350	21/74 (28%)
		GST_C_family	193..304	CDD:295467
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170589594
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.930