DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT1 and gsta4

DIOPT Version :10

Sequence 1:NP_610509.2 Gene:GstT1 / 35995 FlyBaseID:FBgn0050000 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001016676.1 Gene:gsta4 / 549430 XenbaseID:XB-GENE-5835433 Length:233 Species:Xenopus tropicalis


Alignment Length:220 Identity:52/220 - (23%)
Similarity:98/220 - (44%) Gaps:47/220 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKAIK-YYYDFLSQPSRALWIAMKLGKTPFEDCPVALRKQEQLTDEYRSINRFQKVPAI-VDGK 63
            ||:..| :|::...:.....|:....| ..||:..:..|:|.:...:..:: .|::||.: :|| 
 Frog     1 MSEKPKLHYFNGRGKMESIRWLLAAAG-VEFEEEMIETREQFEALFQDGNL-PFKQVPVVEMDG- 62

  Fly    64 FQLGESVSIVRYLADKGVFSEQLYPKTLEERARVDEFLEWQHFNVRLVCSLFFRQ---------V 119
            .:|.::.:|::|:|.|    ..||.|.:.||..:|.::|.....:.::.|..|.|         |
 Frog    63 MKLVQTKAILQYIAAK----YNLYGKDIVERVLIDMYVEGTTEFMEVIMSQPFLQNVEPGMQIDV 123

  Fly   120 WLLPAKGLAPAPKPESVKKLIKDVESNLGLLERLWLEKDFLVGDKLTVADIFGSSEINQMKLCQY 184
            .:..|| :...|..|   |:::|            ..:|||||::.:.|||       |:.....
 Frog   124 LVQKAK-MCYLPVYE---KVLRD------------HGQDFLVGNQFSWADI-------QLLEAIL 165

  Fly   185 NVNEK------QFPKVAKWMERVRD 203
            .:.||      .||.:..:.||:.:
 Frog   166 MIEEKSANVLSNFPLLQDFKERISE 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT1NP_610509.2 GST_N_Theta 5..80 CDD:239348 17/76 (22%)
GST_C_Theta 93..218 CDD:198292 29/126 (23%)
gsta4NP_001016676.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 4..82 CDD:469754 18/84 (21%)
GST_C_Alpha 86..220 CDD:198317 29/128 (23%)

Return to query results.
Submit another query.