DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT1 and Gsto1

DIOPT Version :9

Sequence 1:NP_610509.2 Gene:GstT1 / 35995 FlyBaseID:FBgn0050000 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_034492.1 Gene:Gsto1 / 14873 MGIID:1342273 Length:240 Species:Mus musculus


Alignment Length:189 Identity:48/189 - (25%)
Similarity:75/189 - (39%) Gaps:41/189 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CPVALR-----KQEQLTDEYRSINR-------FQK-----VPAIVDGKFQL-GESVSIVRYLADK 79
            ||.|.|     |.:.:..|..:||.       |:|     ||.:.:.:..| .|||....|| |:
Mouse    32 CPFAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNPLGLVPVLENSQGHLVTESVITCEYL-DE 95

  Fly    80 GVFSEQLYPKTLEERARVDEFLEWQHFNVRLVCSLFFRQVWLLPAKGLAPAPKPESVKKLIKDVE 144
            ....::|:|....::||....|| ....|..:.:.|.|......:..|..|.:.| .|||.:.::
Mouse    96 AYPEKKLFPDDPYKKARQKMTLE-SFSKVPPLIASFVRSKRKEDSPNLREALENE-FKKLEEGMD 158

  Fly   145 SNLGLLERLWLEKDFLVGDKLTVADI-----FGSSEINQMKLCQYNVNEKQFPKVAKWM 198
            :          .|.||.||..::.|.     |...|..::|.|..:.     ||:..||
Mouse   159 N----------YKSFLGGDSPSMVDYLTWPWFQRLEALELKECLAHT-----PKLKLWM 202

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstT1NP_610509.2 GstA 5..204 CDD:223698 48/189 (25%)
GST_N_Theta 5..80 CDD:239348 19/64 (30%)
GST_C_Theta 93..218 CDD:198292 27/111 (24%)
Gsto1NP_034492.1 GST_N_Omega 5..94 CDD:239353 18/62 (29%)
GstA 26..224 CDD:223698 48/189 (25%)