DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT1 and Gdap1

DIOPT Version :9

Sequence 1:NP_610509.2 Gene:GstT1 / 35995 FlyBaseID:FBgn0050000 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_034397.1 Gene:Gdap1 / 14545 MGIID:1338002 Length:358 Species:Mus musculus


Alignment Length:210 Identity:51/210 - (24%)
Similarity:88/210 - (41%) Gaps:30/210 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKYY--YDFLSQPSRALWIAMKLGKTPFEDCPVALRKQEQLTDEYRSINRFQKVPAIVDGKFQLG 67
            |.|:  :.|.||..| |.||.|..|.  |:..|:|...|.....:..:|...:||.:|.|:..:.
Mouse    27 ILYHWTHSFSSQKVR-LVIAEKALKC--EEHDVSLPLSEHNEPWFMRLNSAGEVPVLVHGENIIC 88

  Fly    68 ESVSIVRYLADKGVFSEQLYPKTLEERARVDEFLEWQHFNVRLVCSL----FFRQVWLLP---AK 125
            |:..|:.||  :..|.::..|:.:.:...: .:...||:. .|:.||    :.....|.|   ..
Mouse    89 EATQIIDYL--EQTFLDERTPRLMPDEGSM-YYPRVQHYR-ELLDSLPMDAYTHGCILHPELTVD 149

  Fly   126 GLAPAPKPESVKKLIKDVESNLGLL--ERLWLEKDFLVGDKLTVADIFGSSEINQMKLCQYNVNE 188
            .:.||.....::..|.:.||.|..|  |...|::.::...|..           :.||..:: |.
Mouse   150 SMIPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRL-----------KSKLLDHD-NV 202

  Fly   189 KQFPKVAKWMERVRD 203
            |...|:...:|:|.|
Mouse   203 KYLKKILDELEKVLD 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT1NP_610509.2 GstA 5..204 CDD:223698 51/210 (24%)
GST_N_Theta 5..80 CDD:239348 24/76 (32%)
GST_C_Theta 93..218 CDD:198292 25/120 (21%)
Gdap1NP_034397.1 GST_N_GDAP1 26..98 CDD:239350 24/75 (32%)
GST_C_GDAP1 179..289 CDD:198336 10/51 (20%)
Required for mitochondrial localization. /evidence=ECO:0000250 320..358
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844626
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.