DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT1 and LOC1273988

DIOPT Version :10

Sequence 1:NP_610509.2 Gene:GstT1 / 35995 FlyBaseID:FBgn0050000 Length:228 Species:Drosophila melanogaster
Sequence 2:XP_562680.3 Gene:LOC1273988 / 1273988 VectorBaseID:AGAMI1_006046 Length:218 Species:Anopheles gambiae


Alignment Length:213 Identity:51/213 - (23%)
Similarity:90/213 - (42%) Gaps:41/213 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YYYDFLSQPSRALWIA---------MKLGKTPFEDCPVALRKQEQLTDEYRSINRFQKVPAIVD- 61
            :||...|.|.||:.:.         :||         ..|.|.|.:..|:..:|....:|.:|| 
Mosquito     3 FYYLPGSAPCRAVQMTAAAVGVELNLKL---------TDLMKGEHMKPEFLKLNPQHCIPTLVDE 58

  Fly    62 GKFQLGESVSIVRYLADK-----GVFSEQLYPKTLEERARVDEFLEWQHFNVRLV----CSLFFR 117
            ..|.|.||.:|..||.:|     ...:|:|||.....||.|.:.|   .|:|.::    ...::.
Mosquito    59 DGFVLWESRAIQIYLVEKYCAHDPALAERLYPGDPRRRAVVHQRL---FFDVAILYQRFAEYYYP 120

  Fly   118 QVWLLPAKGLAPAPKPESVKKLIKDVESNLGLLERLWLEKDFLVGDKLTVADIFGSSEINQMKLC 182
            |::     |...|..|:.::.:.:.:|.....||.   |:....||..|:||....:.|...:..
Mosquito   121 QIF-----GKKVAGDPDRLRSMEQALEFLNTFLEG---ERFVAGGDDPTIADFSILASIATFEAA 177

  Fly   183 QYNVNEKQFPKVAKWMER 200
            .|::  :::..:.:|.|:
Mosquito   178 GYDL--RRYENIHRWYEQ 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT1NP_610509.2 GST_N_Theta 5..80 CDD:239348 24/87 (28%)
GST_C_Theta 93..218 CDD:198292 23/112 (21%)
LOC1273988XP_562680.3 None

Return to query results.
Submit another query.