DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT1 and Gsto1

DIOPT Version :9

Sequence 1:NP_610509.2 Gene:GstT1 / 35995 FlyBaseID:FBgn0050000 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001007603.1 Gene:Gsto1 / 114846 RGDID:70952 Length:241 Species:Rattus norvegicus


Alignment Length:202 Identity:43/202 - (21%)
Similarity:83/202 - (41%) Gaps:39/202 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CPVALR-----KQEQLTDEYRSINR-------FQK-----VPAIVDGKFQL-GESVSIVRYLADK 79
            ||.|.|     |.:.:..|..:||.       |:|     ||.:.:.:..| .|||....|| |:
  Rat    32 CPFAQRTLMVLKAKGIRHEIININLKNKPEWFFEKNPFGLVPVLENTQGHLITESVITCEYL-DE 95

  Fly    80 GVFSEQLYPKTLEERARVDEFLEWQHFN-VRLVCSLFFRQVWLLPAKGLAPAPKPESVKKLIKDV 143
            ....::|:|....|:|  .:.:.::.|: |..:.:.|.|            |.:.|....:.:::
  Rat    96 AYPEKKLFPDDPYEKA--CQKMTFELFSKVPSLVTSFIR------------AKRKEDHPGIKEEL 146

  Fly   144 ESNLGLLERLWLEK--DFLVGDKLTVADIFGSSEINQMKLCQYNVNEKQFPKVAKWMERVRD--- 203
            :.....||....:|  .|..|:.|::.|........:::..:.|......||:..||..:::   
  Rat   147 KKEFSKLEEAMAKKRTAFFGGNSLSMIDYLIWPWFQRLEALELNECIDHTPKLKLWMATMQEDPV 211

  Fly   204 ATNPYYD 210
            |::.:.|
  Rat   212 ASSHFID 218

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstT1NP_610509.2 GstA 5..204 CDD:223698 41/194 (21%)
GST_N_Theta 5..80 CDD:239348 19/64 (30%)
GST_C_Theta 93..218 CDD:198292 22/124 (18%)
Gsto1NP_001007603.1 GST_N_Omega 5..94 CDD:239353 18/62 (29%)
GstA 26..214 CDD:223698 42/196 (21%)