DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG1902 and sec14l8

DIOPT Version :9

Sequence 1:	NP_610507.1	Gene:	CG1902 / 35993	FlyBaseID:	FBgn0033434	Length:	312	Species:	Drosophila melanogaster
Sequence 2:	NP_001093463.1	Gene:	sec14l8 / 558964	ZFINID:	ZDB-GENE-060526-180	Length:	395	Species:	Danio rerio

Alignment Length:	248	Identity:	51/248 - (20%)
Similarity:	95/248 - (38%)	Gaps:	38/248 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 TVAKIEALRTWIDK-QIYLE--ARTDDQFLVAFLRFCRWDVEEAKKRVLFYYTYKSKERELLKGR 87
            :|.:.|||..:.:| |..|.  ....|.||:.:||...:::::::..:       .|..|..|..
Zfish     9 SVKQAEALAQFREKVQDVLPQCPSQSDHFLLRWLRARNFNLQKSEAML-------RKHIEFRKHM 66

  Fly    88 QVDDKLIELARSGIFATLPKPIGPG-------GPRIHYTRMGHIEPS--KHSVS--DIFRFHAFR 141
            :||....|..   :...:.|.:..|       |..:.|..:|.::|.  .||.|  |:.:.....
Zfish    67 KVDTITTEWQ---VPEVIDKYLSGGMCGHDREGSPVWYDVIGPLDPKGLMHSASKQDLIKSKVRD 128

  Fly   142 AEIEINTDDNW------NIAGVVEIIDFTKIPYSLLLQFDPGM--FKRMNAFLEHGIPANLVATH 198
            .||.....|..      ||..:..:.|...:....|  :.|.:  :..:....|...|..|....
Zfish   129 CEILQKDCDRQSERLGRNIESITMVYDCEGLGMKHL--YKPAIETYGEVLTMFEDNYPEGLKRLF 191

  Fly   199 IVNASRETQFVLGLVRNVMKQ---KELLHIHSTVAS-LRKAIGLEYLPVEMGG 247
            ::.|.:.......||::.:.:   ::::.:.|.... |:|.|..|.||...||
Zfish   192 VIKAPKLFPVAYNLVKHFLSEDTRRKVIVLGSNWQEVLQKYIDPEELPAYYGG 244

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1902	NP_610507.1	CRAL_TRIO_N	28..69	CDD:215024	11/43 (26%)
CG1902	NP_610507.1	CRAL_TRIO	100..248	CDD:279044	33/171 (19%)
sec14l8	NP_001093463.1	CRAL_TRIO_N	13..59	CDD:215024	11/52 (21%)
		SEC14	78..246	CDD:214706	33/169 (20%)
		GOLD_2	304..382	CDD:290608
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810