DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1902 and Clvs1

DIOPT Version :10

Sequence 1:NP_610507.1 Gene:CG1902 / 35993 FlyBaseID:FBgn0033434 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001102439.1 Gene:Clvs1 / 366311 RGDID:1564200 Length:354 Species:Rattus norvegicus


Alignment Length:330 Identity:80/330 - (24%)
Similarity:136/330 - (41%) Gaps:51/330 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKIRSLE----PELAEVARTQLCEDPSSTVAKIEALRTWIDKQIYLE-ARTDDQFLVAFLRFCR 60
            :||:..|:    |:..|.||.:|.|:|......|:.:|..|..:..:. .||||.|::.|||..:
  Rat    20 LAKMTHLQAGLSPDTIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARK 84

  Fly    61 WDVEEAKKRVLFYYTYKSKERELLKGRQVDDKLIELARSGIFATLPKPIGPG--GPRIHYTR--- 120
            :...:|.:.:..|:.|:....::.|..:.||..|:.|....|        ||  ..|.||.|   
  Rat    85 FHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGF--------PGVLENRDHYGRKIL 141

  Fly   121 ---MGHIEPSKHSVSDIFRFHAFRAEIEINTDDNWNIAGVVEIIDFTKIPYSLLLQFDPGMFKRM 182
               ..:.:.|::|.:||.|......|:.|. |....|.|.:.|||::...:....:..|.:.|..
  Rat   142 LLFAANWDQSRNSFTDILRAILLSLEVLIE-DPELQINGFILIIDWSNFSFKQASKLTPSILKLA 205

  Fly   183 NAFLEHGIPANLVATHIVNASRETQFVLGLVRNVMKQK--ELLHIH-STVASLRKAIGLEYLPVE 244
            ...|:...||.....|.||.......:..|::..:|.|  :.:.:| :.:.||.:.|..|:||.|
  Rat   206 IEGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSE 270

  Fly   245 MGG-----DNGSLSDAMTRYETQLLSFSPYFTEDERY------------GVDEKLREASEKDQER 292
            .||     |.|:.:..:         ..|.::::..|            ......||.|.|..:|
  Rat   271 FGGTLPPYDMGTWARTL---------LGPDYSDENDYTHTSYNAMYVKHTCSNLERECSPKPMKR 326

  Fly   293 GAPLV 297
            ...:|
  Rat   327 SQSVV 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1902NP_610507.1 CRAL_TRIO_N 28..69 CDD:215024 12/41 (29%)
CRAL_TRIO 113..247 CDD:459890 36/142 (25%)
Clvs1NP_001102439.1 CRAL_TRIO_N 51..97 CDD:215024 12/45 (27%)
SEC14 123..274 CDD:469559 40/159 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354 6/15 (40%)

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