DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG1902 and retm

DIOPT Version :9

Sequence 1:	NP_610507.1	Gene:	CG1902 / 35993	FlyBaseID:	FBgn0033434	Length:	312	Species:	Drosophila melanogaster
Sequence 2:	NP_001260132.1	Gene:	retm / 33899	FlyBaseID:	FBgn0031814	Length:	707	Species:	Drosophila melanogaster

Alignment Length:	201	Identity:	40/201 - (19%)
Similarity:	74/201 - (36%)	Gaps:	41/201 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    28 AKIEALRTWIDKQIYLEARTDDQFLVAFLRFCRWDVEEAKKRVLFYYTYKSKERELLKGRQVDDK 92
            :|:..||..:|....||.....|.::.||....|.|.:|...:.....::.:.|       :|..
  Fly   223 SKLLELRKMLDGVDDLERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRREHR-------IDAL 280

  Fly    93 LIELARSGI----FATLPKPIGPGG---------PRIHYTRMGHIEPSKHSVSDIFRFHAFRAEI 144
            |.|.::..:    |        |||         | ::..|:||:: .|..:..:......|..:
  Fly   281 LAEYSKPAVVVEHF--------PGGWHHLDKDGRP-VYILRLGHMD-VKGLLKSLGMDGLLRLAL 335

  Fly   145 EINTDDNWNIAGVVEIIDFTKIPYSLLLQFD---------PGMFKRMNAF--LEHGIPANLVATH 198
            .|..:....|....|.::...:.:|||:..:         ||:...:|..  :|...|..:....
  Fly   336 HICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVL 400

  Fly   199 IVNASR 204
            :|.|.|
  Fly   401 VVRAPR 406

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1902	NP_610507.1	CRAL_TRIO_N	28..69	CDD:215024	12/40 (30%)
CG1902	NP_610507.1	CRAL_TRIO	100..248	CDD:279044	24/129 (19%)
retm	NP_001260132.1	PRELI	17..173	CDD:282550
		CRAL_TRIO_N	222..268	CDD:215024	12/44 (27%)
		CRAL_TRIO	293..456	CDD:279044	24/124 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810