DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1902 and Ttpal

DIOPT Version :9

Sequence 1:NP_610507.1 Gene:CG1902 / 35993 FlyBaseID:FBgn0033434 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001100007.1 Gene:Ttpal / 296349 RGDID:1305754 Length:343 Species:Rattus norvegicus


Alignment Length:311 Identity:82/311 - (26%)
Similarity:140/311 - (45%) Gaps:21/311 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SLEPELAEVARTQLCEDPSSTVAKIEALRTWIDKQI-YLEARTDDQFLVAFLRFCRWDVEEAKKR 69
            ||..:|...||.:|.|.|...:..::|||..:.|:. ||....||.||:.|||..::|.:.|.:.
  Rat    35 SLTEDLVTKAREELQEKPEWRLRDVQALRDMVRKEYPYLSTSLDDAFLLRFLRARKFDYDRALQL 99

  Fly    70 VLFYYTYKSKERELLKGRQVDDKLIELARSGIFATLPKPIGPGGPRIHYTRMGHIEPSKHSVSDI 134
            ::.|:..:....|:....: ...|.::..||....||. ..|.|..:...|.....||.:.:::.
  Rat   100 LVNYHGCRRSWPEVFSNLR-PSALKDVLNSGFLTVLPH-TDPRGCHVLCIRPDRWIPSNYPITEN 162

  Fly   135 FRFHAFRAEIEINTDDNWNIAGVVEIIDFTKIPYSLLLQFDPGMFKRMNAFLEHGIPANLVATHI 199
            .|......|..|.:::. .:.|||.:.|:..:..|....|.|.:.:::...|:.|.|..:.|.||
  Rat   163 IRAIYLTLEKLIQSEET-QVNGVVILADYKGVSLSKASHFGPFIARKVIGILQDGFPIRIKAVHI 226

  Fly   200 VNASRETQFVLGLVRNVMKQK--ELLHIH-STVASLRKAIGLEYLPVEMGGDNGSLSDAMTRYET 261
            ||..|..:.:..:::..:|:|  ....:| |.::||..::....||.|.||..|.|..|  .:..
  Rat   227 VNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLSSLHTSLPRNILPKEYGGTAGELDTA--SWNA 289

  Fly   262 QLLSFSPYFTEDERYGVDEKLREASEKDQERGAP-----LVTDVPNDGTFR 307
            .||:     :||:  .|.|..:..|..|...|.|     |::|...|.:.|
  Rat   290 VLLA-----SEDD--FVKEFCQPESGCDGLLGQPLLPEGLISDAQCDDSMR 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1902NP_610507.1 CRAL_TRIO_N 28..69 CDD:215024 15/41 (37%)
CRAL_TRIO 100..248 CDD:279044 37/150 (25%)
TtpalNP_001100007.1 CRAL_TRIO_N 57..103 CDD:215024 15/45 (33%)
SEC14 122..278 CDD:238099 39/157 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1031056at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10174
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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