DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1902 and clvs2

DIOPT Version :9

Sequence 1:NP_610507.1 Gene:CG1902 / 35993 FlyBaseID:FBgn0033434 Length:312 Species:Drosophila melanogaster
Sequence 2:XP_017949794.1 Gene:clvs2 / 100496225 XenbaseID:XB-GENE-1005080 Length:327 Species:Xenopus tropicalis


Alignment Length:307 Identity:72/307 - (23%)
Similarity:133/307 - (43%) Gaps:26/307 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LEPELAEVARTQLCEDPSSTVAKIEALRTWIDKQIYLE-ARTDDQFLVAFLRFCRWDVEEAKKRV 70
            |.||..|.||.:|.|:|.:....|:.:|..:..:..:. .||||.|::.|||..:::..||.:.:
 Frog     8 LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFNHFEAFRLL 72

  Fly    71 LFYYTYKSKERELLKGRQVDDKLIELARSGIFATLPKPIGPGGPRIHYTRMGHIEPSKHSVSDIF 135
            ..|:.|:.:..::.|..:..|..|:......|..:...:...|.:|......:.:.|::::.||.
 Frog    73 AQYFEYRQQNLDMFKNFKATDPGIKQGLKDGFPGVLSNLDHFGRKILVLFAANWDQSRYTLVDIL 137

  Fly   136 RFHAFRAEIEINTDDNWNIAGVVEIIDFTKIPYSLLLQFDPGMFKRMNAFLEHGIPANLVATHIV 200
            |......|..|. |....:.|.|.|||::...:....:..|.|.:.....|:...||.....|.|
 Frog   138 RAILLSLEAMIE-DPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFV 201

  Fly   201 NASRETQFVLGLVRNVMKQK--ELLHIH-STVASLRKAIGLEYLPVEMGG-----DNGSLSDAMT 257
            |.......:..::|..:|:|  :.:.:| :.:.||.:.|..|.||.|.||     |.|:.:..:.
 Frog   202 NQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEILPSEFGGMLPPYDMGTWARTLL 266

  Fly   258 RYETQLLSFSPYFTEDERYGVD-------EKLREASEKDQERGAPLV 297
            .:|         :.::..|.|:       |..::.|.|..:|...:|
 Frog   267 DHE---------YDDESEYNVESYSMPTKEVEKDLSPKAMKRSQSVV 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1902NP_610507.1 CRAL_TRIO_N 28..69 CDD:215024 12/41 (29%)
CRAL_TRIO 100..248 CDD:279044 36/155 (23%)
clvs2XP_017949794.1 CRAL_TRIO_N 29..75 CDD:215024 12/45 (27%)
SEC14 106..251 CDD:238099 33/145 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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