DRSC/TRiP Functional Genomics Resources

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Protein Alignment Urod and HEM12

DIOPT Version :9

Sequence 1:NP_610501.1 Gene:Urod / 35986 FlyBaseID:FBgn0033428 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_010332.3 Gene:HEM12 / 851617 SGDID:S000002454 Length:362 Species:Saccharomyces cerevisiae


Alignment Length:355 Identity:170/355 - (47%)
Similarity:227/355 - (63%) Gaps:7/355 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FPVLKNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKHHDFFTVCRTPELACEVTMQPLRR 71
            ||..|||.:||||:||.|:|.|.|:||||||||||:.|::.:.|||..||..|:|.|:|:||:||
Yeast     4 FPAPKNDLILRAAKGEKVERPPCWIMRQAGRYLPEYHEVKNNRDFFQTCRDAEIASEITIQPVRR 68

  Fly    72 FD--LDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLT--PDGALSRLSYVGDA 132
            :.  :||:||||||||||||:|:.|||..|.||..|:|:..||||:.:.  ....|..|.:...|
Yeast    69 YRGLIDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDVLKELDWAFKA 133

  Fly   133 ITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNLLTDAIVDY 197
            |||.|.||:|.|||.||.|.|||||.||.|||||:....||.|:|.:||.|...|..:||..|::
Yeast   134 ITMTRIKLDGEVPLFGFCGGPWTLMVYMTEGGGSRLFRFAKQWINMYPELSHKLLQKITDVAVEF 198

  Fly   198 LEMQVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKAI-PVVPMTLFAKGAG 261
            |..||.||||:||||||....||...|.::.:|||::|.:.:..||.:..| ..:||.:||||:.
Yeast   199 LSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAERVPKRLQELGIMEQIPMIVFAKGSW 263

  Fly   262 HSLKEQSELGYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMYRDPDELRNLTTEMVHKF--G 324
            ::|.:....|:||:.|||:.||.||..:....:||||||||..||...:.:.....:|:..|  |
Yeast   264 YALDKLCCSGFDVVSLDWSWDPREAVKINKNRVTLQGNLDPGVMYGSKEVITKKVKQMIEAFGGG 328

  Fly   325 KSRYIANLGHGITPQTPITSMEVLVEAVHK 354
            |||||.|.|||..|......::..:|..|:
Yeast   329 KSRYIVNFGHGTHPFMDPDVIKFFLEECHR 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UrodNP_610501.1 hemE 14..354 CDD:273640 164/346 (47%)
HEM12NP_010332.3 URO-D 13..358 CDD:238368 164/344 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343282
Domainoid 1 1.000 313 1.000 Domainoid score I200
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H320
Inparanoid 1 1.050 317 1.000 Inparanoid score I458
Isobase 1 0.950 - 0 Normalized mean entropy S855
OMA 1 1.010 - - QHG54670
OrthoFinder 1 1.000 - - FOG0003767
OrthoInspector 1 1.000 - - oto99094
orthoMCL 1 0.900 - - OOG6_100829
Panther 1 1.100 - - LDO PTHR21091
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R302
SonicParanoid 1 1.000 - - X2624
TreeFam 00.000 Not matched by this tool.
1413.880

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