DRSC/TRiP Functional Genomics Resources

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Protein Alignment Urod and Urod

DIOPT Version :9

Sequence 1:NP_610501.1 Gene:Urod / 35986 FlyBaseID:FBgn0033428 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_033504.2 Gene:Urod / 22275 MGIID:98916 Length:367 Species:Mus musculus


Alignment Length:349 Identity:190/349 - (54%)
Similarity:236/349 - (67%) Gaps:1/349 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FPVLKNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKHHDFFTVCRTPELACEVTMQPLRR 71
            ||.||||..||||.||..|..|||.|||||||||||:|.|...|||:.||:||..||:|:|||||
Mouse    11 FPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRR 75

  Fly    72 FDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRL-TPDGALSRLSYVGDAITM 135
            |.|||:||||||||:|||||:.|.|..|.||..|:|:....||:|| .|..|.|.|.||..|||:
Mouse    76 FPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAAASELGYVFQAITL 140

  Fly   136 MRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNLLTDAIVDYLEM 200
            .|.:|.||||||||.|||||||.||:|||.|.||::||.||.:.|:.|...|.:|||.:|.||..
Mouse   141 TRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHKLLGILTDVLVPYLIG 205

  Fly   201 QVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKAIPVVPMTLFAKGAGHSLK 265
            ||.||||.||:|||.|.||..|.|.::.:||::.:...:...|.|..:..|||.:|||....:|:
Mouse   206 QVAAGAQALQLFESHAGHLGTELFSKFALPYIRDVAKRVKAGLQKAGLAPVPMIIFAKDGHFALE 270

  Fly   266 EQSELGYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMYRDPDELRNLTTEMVHKFGKSRYIA 330
            |.::.||:|:||||||.|.:||..||..:||||||||..:|...:|:..|..:|:..||..||||
Mouse   271 ELAQAGYEVVGLDWTVAPKKARERVGKAVTLQGNLDPCALYASEEEIGRLVQQMLDDFGPQRYIA 335

  Fly   331 NLGHGITPQTPITSMEVLVEAVHK 354
            |||||:.|......:...|:||||
Mouse   336 NLGHGLYPDMDPERVGAFVDAVHK 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UrodNP_610501.1 hemE 14..354 CDD:273640 182/340 (54%)
UrodNP_033504.2 URO-D 20..359 CDD:238368 184/340 (54%)
Substrate binding. /evidence=ECO:0000250 37..41 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835716
Domainoid 1 1.000 369 1.000 Domainoid score I912
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H320
Inparanoid 1 1.050 374 1.000 Inparanoid score I2079
Isobase 1 0.950 - 0 Normalized mean entropy S855
OMA 1 1.010 - - QHG54670
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003767
OrthoInspector 1 1.000 - - oto92234
orthoMCL 1 0.900 - - OOG6_100829
Panther 1 1.100 - - LDO PTHR21091
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R302
SonicParanoid 1 1.000 - - X2624
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.880

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