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Protein Alignment Smyd4-1 and Smyd3

DIOPT Version :9

Sequence 1:	NP_610500.2	Gene:	Smyd4-1 / 35985	FlyBaseID:	FBgn0033427	Length:	751	Species:	Drosophila melanogaster
Sequence 2:	NP_081464.1	Gene:	Smyd3 / 69726	MGIID:	1916976	Length:	428	Species:	Mus musculus

Alignment Length:	353	Identity:	81/353 - (22%)
Similarity:	132/353 - (37%)	Gaps:	110/353 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly   216 GEILTDPGPRGRYMVAKEAISKGNVIFSERASCFVPLEQLLICQQCAATLMSAPIPCPNCHQRVV 280
            ||:|....|.. |.|.|.  |:|  :..:|  |.:..|:|:.|.||                |:.
Mouse    27 GELLFRSDPLA-YTVCKG--SRG--VVCDR--CLLGKEKLMRCSQC----------------RIA 68

  Fly   281 -YCSRKCREAHSAIHKFECAA-------YRKDILRLLGISHLALRLLLTYIPYIRPHLQEMTSAK 337
             |||.||::.....|:.||:.       |..|.:||||      |::
Mouse    69 KYCSAKCQKKAWPDHRRECSCLKSCKPRYPPDSVRLLG------RVI------------------ 109

  Fly   338 GMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFH 402
                 :..:..||.|||....:......:|:|.:...|.|..   .|...|.:::|......|
Mouse   110 -----VKLMDEKPSESEKLYSFYDLESNISKLTEDKKEGLRQ---LAMTFQHFMREEIQDASQ-- 164

  Fly   403 SLPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRGQLHN 467
             ||.|.:.::.....:...|.   :.|..:.:  :|||:.|.
Mouse   165 -LPPSFDLFEAFAKVICNSFT---ICNAEMQE--VGVGLYPS----------------------- 200

  Fly   468 LSHSDPITAINLPYLSLCNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCYTMDYRNSLKLQR 532
                          :||.||:|:|:....|:|..::..|.::|..|||:..|| :|...:.: :|
Mouse   201 --------------MSLLNHSCDPNCSIVFNGPHLLLRAVREIEAGEELTICY-LDMLMTSE-ER 249

  Fly   533 SHPLKAIYKFECTCAKCTRTDPDQNYLS 560
            ...|:..|.|||.|.:|...|.|.:.|:
Mouse   250 RKQLRDQYCFECDCIRCQTQDKDADMLT 277

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.