DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and AT1G26761

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001117357.1 Gene:AT1G26761 / 6241260 AraportID:AT1G26761 Length:444 Species:Arabidopsis thaliana


Alignment Length:281 Identity:59/281 - (20%)
Similarity:95/281 - (33%) Gaps:87/281 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ARTFSQQNELITLN---ENYKDE-----------FETFKSLASMPADILQIFQKLALDLLQDLEQ 55
            :||......|.||:   ..|:::           ..|.||..:.....:.:.:.|..||      
plant    14 SRTVQPYRRLSTLSLRFPTYRNKRVSPFTLTITRCSTTKSREAGQDSSISLKRGLVFDL------ 72

  Fly    56 PVDRKGCAERSKNLREEGNLMFKESAS-----------GSSKDSVLKACRLYSEAVFEAENAV-E 108
                 |.::.|.:..|.|:.:.|...|           ||||                 :|.| :
plant    73 -----GVSKDSWHSEEIGSPVVKRFLSDNEERWYMWYHGSSK-----------------QNPVSD 115

  Fly   109 ELSLAFANRGIALQEYGYYREAYDDCSNALECG--------YPERLRHKVIMRQAFCAWKLKKIA 165
            .:.||.:|.||..:......|:.:|....:.||        ...|....|||..:    |::..:
plant   116 SIGLAVSNNGIHWERGNGKVESSEDVGLVMSCGEDWWGFDTASVRPGEVVIMSSS----KVRANS 176

  Fly   166 SLEEHLDYLGQLQLKESFEQQLEDLKQKLELLKNQPR-----EQETQGKVVDKSLGEILTDPG-- 223
            |: ..:.|.|  ..||:.|.|.:|.   ..:|.|..|     |...:.:|..:||      ||  
plant   177 SV-YWMYYTG--YTKETVEFQSQDF---TSVLGNPERFHLCDENAEKSRVYYRSL------PGLA 229

  Fly   224 --PRGRYMVAKEAISKGNVIF 242
              ..||:....|.......:|
plant   230 ISQDGRHWARIEGEHHSGALF 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 6/30 (20%)
zf-MYND 258..298 CDD:460312
SET <359..549 CDD:394802
AT1G26761NP_001117357.1 GH43_62_32_68_117_130 <99..>130 CDD:449341 11/47 (23%)
GH43_62_32_68_117_130 202..430 CDD:449341 13/55 (24%)
Blue background indicates that the domain is not in the aligned region.

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