DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Smyd4-1 and Zmynd15

DIOPT Version :9

Sequence 1:	NP_610500.2	Gene:	Smyd4-1 / 35985	FlyBaseID:	FBgn0033427	Length:	751	Species:	Drosophila melanogaster
Sequence 2:	NP_001025100.1	Gene:	Zmynd15 / 574428	MGIID:	3603821	Length:	736	Species:	Mus musculus

Alignment Length:	112	Identity:	25/112 - (22%)
Similarity:	39/112 - (34%)	Gaps:	42/112 - (37%)

- Green bases have known domain annotations that are detailed below.

  Fly   271 PCPNCHQRVVYCSRKCREA------HSAIHKFEC---AAYRKDILRLLGISHLALRLLLTYIPYI 326
            |||.| ..|:||...|.:|      ....|:|.|   :|:.:.:..|..            :|:
Mouse   321 PCPQC-SAVLYCGEACLQADWRRCPDDVSHRFWCPRLSAFMERVGELAS------------LPF- 371

  Fly   327 RPHLQEMTS--------------AKGMWEEIMNLSRKPEESENAPEY 359
             .:..|:||              .:|.|.::..|...|    .||.|
Mouse   372 -TYTAEVTSETFNKEAFLASRGLTRGYWTQLSMLIPGP----GAPRY 413

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Smyd4-1	NP_610500.2	zf-MYND	258..298	CDD:280009	11/32 (34%)
Smyd4-1	NP_610500.2	SET	<447..526	CDD:214614
Zmynd15	NP_001025100.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	70..94
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	109..192
		zf-MYND	307..353	CDD:280009	11/32 (34%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	556..583
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	696..736
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167838889
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG2084
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.830