DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and SMYD2

DIOPT Version :9

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_064582.2 Gene:SMYD2 / 56950 HGNCID:20982 Length:433 Species:Homo sapiens


Alignment Length:479 Identity:95/479 - (19%)
Similarity:173/479 - (36%) Gaps:153/479 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 KSLG--EILTDPGPRGRYMVAKEAISKGNVIFS-----------ERAS----CFVPLEQLLICQQ 260
            :.||  |....|| :||.:.|.:....|:::||           ||.:    ||...|.|..|.:
Human     4 EGLGGLERFCSPG-KGRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKEGLSKCGR 67

  Fly   261 CAATLMSAPIPCPNCHQRVVYCSRKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPY 325
            |               ::..||:.:|::....:||.||:.                  ::.:...
Human    68 C---------------KQAFYCNVECQKEDWPMHKLECSP------------------MVVFGEN 99

  Fly   326 IRPHLQEMTSAKGMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLY 390
            ..|......:|:.:.::.::..|.|.|     :.|......|.||:..:|:       .:|:|..
Human   100 WNPSETVRLTARILAKQKIHPERTPSE-----KLLAVKEFESHLDKLDNEK-------KDLIQSD 152

  Fly   391 LKEHTDFYDQFHSLPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQ 455
            :.....||.:....|.:        .:|::.|| |:..||..        :|.:|          
Human   153 IAALHHFYSKHLGFPDN--------DSLVVLFA-QVNCNGFT--------IEDEE---------- 190

  Fly   456 KPRHLKRGQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCY 520
                        |||   :.:...|.::|.||:|.|::...:.|......|.::|..|||:|..|
Human   191 ------------LSH---LGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIKPGEEVFTSY 240

  Fly   521 ------TMDYRNSLKLQRSHPLKAIYKFECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPDA 579
                  |.|        |:..|:..|.|.|.|.:||..|.|:..:...  :...|       |.|
Human   241 IDLLYPTED--------RNDRLRDSYFFTCECQECTTKDKDKAKVEIR--KLSDP-------PKA 288

  Fly   580 KVQQNNLRWWLRCNAEKPITCTVCHEL---QHFAWYNEFLGLIGSSADSSKRQALFKAFDDLDKW 641
            :..::.:|:          ...|..|.   :|:...:|.|.:...|     ::.:...|:|.:.:
Human   289 EAIRDMVRY----------ARNVIEEFRRAKHYKSPSELLEICELS-----QEKMSSVFEDSNVY 338

  Fly   642 LVDHHSLKRIMAEELVTACFYEID 665
            ::  |.:.:.|.     .|.|..|
Human   339 ML--HMMYQAMG-----VCLYMQD 355

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 7/39 (18%)
SET <447..526 CDD:214614 19/84 (23%)
SMYD2NP_064582.2 SET_SMYD2 7..269 CDD:380979 74/357 (21%)
S-adenosyl-L-methionine binding 17..19 0/1 (0%)
zf-MYND 52..90 CDD:396356 11/52 (21%)
Peptide substrate binding 183..185 1/1 (100%)