DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and AgaP_AGAP011233

DIOPT Version :9

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_564259.2 Gene:AgaP_AGAP011233 / 3291278 VectorBaseID:AGAP011233 Length:393 Species:Anopheles gambiae


Alignment Length:407 Identity:84/407 - (20%)
Similarity:151/407 - (37%) Gaps:103/407 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EQPVDRKGCAERSKNLREEGNL---------MFKESASGSS-----KDSVLKACRLYSEAVFEAE 104
            |:.||:.....||..:|::.||         .....|.|::     ..:.::|.:.::.::...|
Mosquito    49 ERFVDQIIILVRSGGIRDQLNLAPDVKGHVAALAYRAQGTALYHPRVCNYIEALKYFNASIAHTE 113

  Fly   105 -NAVEELSLAFANRGIALQEYGYYREAYDDCSNALECGYPERLRHKVIMRQAFCAWKLKKIASLE 168
             |:|:. .:|:|||.|...|...|.:...:...|....||.|...|:..|:|.....|:::.::.
Mosquito   114 LNSVDR-GIAYANRSIVCMELHQYEDCVANVRLARASNYPVRFLPKLAAREARAQHALQRVRTIN 177

  Fly   169 EHLDYLGQLQLKESFEQQLEDLKQKLELLKNQPREQETQGKVVDKSLGEILTDPGPRGRYMVAKE 233
            ......|....:.:::||          .|.||        .......|:.|..||....:..  
Mosquito   178 ARKQKNGHRSAERNWQQQ----------EKKQP--------TAANGAEELSTKLGPHLHGLAV-- 222

  Fly   234 AISKGNVIFSERASCFVPLEQLLI-CQQCAATLMSAPIPCPNCHQRVVYCSRKC-REAHSAIHKF 296
                            |..|||.. |..|.:..:...|||..| ...::||..| .||:...|::
Mosquito   223 ----------------VEYEQLYARCNYCHSRRLFTFIPCEGC-TVAMFCSVACLTEAYRKYHRY 270

  Fly   297 ECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQEMTSAKGMWEEIMNLSRKPEESENAPEYLR 361
            ||...| |:.::.|                   .:.:|:.:.:..|:.:....|    ::.|||.
Mosquito   271 ECGLVR-DLWKIGG-------------------AEAVTAFRRVAAELASFPDVP----SSVEYLE 311

  Fly   362 SL-------RMVSQLDQAIDEE-----LNYHILCANLLQLYLKEHTDFYDQFHSLPASIEDWQL- 413
            ..       .:...|:.|..:|     |:|.|...:::...:.|.|..  :|    ..|||.:: 
Mosquito   312 LFVAMKGYCAVADGLEGATVQENDHRQLSYRIFLTDIIHQLMVERTVL--RF----CCIEDPRIS 370

  Fly   414 -IISALILRF----AGQ 425
             ::..|||.:    |||
Mosquito   371 RLLFELILYYLTSCAGQ 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 12/40 (30%)
SET <447..526 CDD:214614
AgaP_AGAP011233XP_564259.2 TPR_11 80..148 CDD:290150 14/68 (21%)
zf-MYND 232..272 CDD:280009 12/40 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1278034at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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