DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smyd4-1 and AgaP_AGAP011234

DIOPT Version :9

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_564258.1 Gene:AgaP_AGAP011234 / 3291277 VectorBaseID:AGAP011234 Length:646 Species:Anopheles gambiae


Alignment Length:577 Identity:131/577 - (22%)
Similarity:222/577 - (38%) Gaps:143/577 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QIFQKLALDLLQD-LEQPVDRKGCAERSKNL--REEGNLMFKESASGSSKDSVLKACRLYSEAVF 101
            :|...|...||:: |....|.|   :.:|.|  |..||.:|....   .||  |:|.:.|:|::.
Mosquito    46 EIEDYLRTSLLRERLHLQPDTK---DNAKALAARNRGNELFVPKL---GKD--LEALQHYNESIA 102

  Fly   102 EAENAVEELSLAFANRGIALQEYGYYREAYDDCSNALECGYPERLRHKVIMRQAFCAWKLKKIAS 166
            .:|...|..:||:.:|.:...::..::|..::...|....||.||..::..|:.:.    ||..:
Mosquito   103 YSEPGSEARALAYGDRSVVCLKFNLFKECLENIRLARASNYPARLADQLSEREQYA----KKCLN 163

  Fly   167 LEEHL----------DY----LGQLQLKESFE--QQLEDLKQKLELLKNQPREQETQGKVVDKSL 215
            |...:          .|    .|:..|:.|:|  :.:..|.:.:||      .|:::        
Mosquito   164 LLPPIFPDPARRTPGKYRPRGTGRPALQLSYEAHRNIPHLVKCVEL------RQDSE-------- 214

  Fly   216 GEILTDPGPRGRYMVAKEAISKGNVIFSER--ASCFVPLEQLLICQQCAATLMSAPIPCPNCHQR 278
                     .||::|..:.:..|:|:..|:  ||.....:|...|..|........|||..| ..
Mosquito   215 ---------FGRHLVTTQHLKAGDVLMIEKPYASLLCERDQYKRCAFCHNEDTFTLIPCEGC-TV 269

  Fly   279 VVYCSRKCRE-AHSAIHKFECAAYRKDILRLLGI---SHLALRLLLTYIPYIRPHLQEMTSAKGM 339
            .:|||.:||: ||...|::|||..| |..|.:|.   ..|.||.:.|       .......:.|.
Mosquito   270 AMYCSEECRDKAHKQYHRYECAVLR-DCWRSVGFPVEMLLGLRTVAT-------AFASFDQSLGQ 326

  Fly   340 WEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEEL--NYHILCAN----------------- 385
            |  |..:....|...||        .....::|.|.::  ..|:|..|                 
Mosquito   327 W--IYRMETLDETKVNA--------FTVDWNKATDRDIYDTVHVLATNQNRRDHKQLASLIFFAY 381

  Fly   386 LLQLYLKEHTDFYDQFHSLPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQ 450
            ::|..|.:.|:......|.|:.    :.::..|:||.....|.|.:        .:...|.|.|:
Mosquito   382 IVQGLLLDRTELRPLCWSCPSR----RKLLFELLLRHTQTALTNKN--------DVYHMERVKLE 434

  Fly   451 PELWQKPRHLK-----------------RGQLHNLSHSDPITAINL-PYLSLCNHACEPSIRT-- 495
            .:      |::                 |....|:.|.:...||.: |..|:.||:|.|::..  
Mosquito   435 DD------HVEDDESEEDSSVDNNNSDDRKSPRNVHHEERTHAIAIYPLFSMVNHSCIPNVAPIH 493

  Fly   496 KFDGCSVVNYAAKDILEGEEIFNC---YTMDYRNSLKLQRSHPLKAIYKFECTCAKC 549
            ..|| .:...|.:.|..||:::|.   .|.|..:|   .|.|.|:..:.|:|.||.|
Mosquito   494 LLDG-RLAMVATRPIAAGEQLYNINGFSTFDPDDS---ARRHALQLSHFFKCRCASC 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 14/40 (35%)
SET <447..526 CDD:214614 23/101 (23%)
AgaP_AGAP011234XP_564258.1 TPR_11 71..140 CDD:290150 19/73 (26%)
zf-MYND 250..290 CDD:280009 14/40 (35%)
SET <479..515 CDD:279228 11/36 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1278034at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.