DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smyd4-1 and AgaP_AGAP000216

DIOPT Version :9

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_566179.1 Gene:AgaP_AGAP000216 / 3289638 VectorBaseID:AGAP000216 Length:526 Species:Anopheles gambiae


Alignment Length:578 Identity:126/578 - (21%)
Similarity:200/578 - (34%) Gaps:171/578 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LQDLEQPVDRKGCAERSKNLRE------EGNLMFKESASGSSKDSVLKACRLYSEAVFEAENAVE 108
            :.|..|...::|.....|:.|:      |||.|...:..     ..:.|.:||::          
Mosquito     1 MADNSQRAGQQGLLVDGKDNRKAAELCVEGNAMHYNNVK-----RYMDAVKLYNK---------- 50

  Fly   109 ELSLAFANRGIALQEYGYYREA--------YDDCSN----ALECGYPERLRHKVIMRQAFCAWKL 161
              |:|::.:|...:...|:..:        |.||..    |.:...|..||.|:...:. ||..:
Mosquito    51 --SIAYSTKGSPERAQAYWERSKVCVKLNQYADCQQNLRLARDSDGPGLLRRKLDESER-CARSM 112

  Fly   162 KKIAS------LEEHLDYLGQLQLKESFEQQLEDLKQKLELLKNQPREQETQGKVVDKSLGEILT 220
            ...|:      ...|    |...||.||           ...:|.||        |...| |:..
Mosquito   113 LLSATDDATPGSSRH----GAAPLKLSF-----------PAYENAPR--------VANCL-EMRR 153

  Fly   221 DPGPRGRYMVAKEAISKGNVIFSER--ASCFVPLEQLLICQQCAATLMSAPIPCPNCHQRVVYCS 283
            .| ..|||:...:|:..|:|:..:.  .|...|......|..|........|||..| .:.:|||
Mosquito   154 SP-QYGRYLQTNKALKVGDVVMIDEPYVSVLEPEFCYARCDHCQRPAPFTLIPCERC-TKAMYCS 216

  Fly   284 RKC-REAHSAIHKFECAAYR------KDILRLLGISHLALRLLLTYIPYIRPHLQ---------E 332
            :.| |.|.:..|:||||...      :|.:.||. .....|.:.||...:| ||:         |
Mosquito   217 KNCLRRARTEYHEFECALVHHLTETTRDPVVLLA-WRAVTRAISTYRYNLR-HLKQRRNYLSRTE 279

  Fly   333 MTSAKGMWEE-----------IMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANL 386
            :......|.:           :.:|:|.|.:...|        .|:|    |..|::.|::..| 
Mosquito   280 VNPLMLNWVDGQKIAFSAVYILASLARAPNDPVEA--------RVAQ----ISREMHCHLVSEN- 331

  Fly   387 LQLYLKEHTDFYDQFHSLPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQP 451
                   .....|...|:|   ..|   :..:..||...:..|.                     
Mosquito   332 -------GQTANDDSGSVP---YPW---VGEMCYRFLKVMQCNA--------------------- 362

  Fly   452 ELWQKPRHLKR-----GQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKFD----GCSVVNYAA 507
                :|..|.|     ||...:    |......|.:||.||:|.|:::. ||    .||.|  ..
Mosquito   363 ----RPAQLTRRDEPEGQYRAV----PFALRCHPLISLLNHSCAPNVKC-FDLRDGRCSAV--VI 416

  Fly   508 KDILEGEEIFNCYTMDYRNSLKLQRSHPLKAIYKFECTCAKCTRTDPDQNYLSFHRYR 565
            :.|..|.::|..|..||..:.:.:|...|:.::.|.|.|..|     :.||.:...:|
Mosquito   417 QPIAAGGQLFANYGYDYLQTGRDERREGLQRVFGFTCNCDAC-----ENNYPTAEPFR 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 14/40 (35%)
SET <447..526 CDD:214614 24/87 (28%)
AgaP_AGAP000216XP_566179.1 TPR_11 22..93 CDD:290150 15/87 (17%)
zf-MYND 192..232 CDD:280009 14/40 (35%)
SET <371..430 CDD:279228 18/65 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D30377at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.