DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and AgaP_AGAP000041

DIOPT Version :9

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_566389.3 Gene:AgaP_AGAP000041 / 3289599 VectorBaseID:AGAP000041 Length:522 Species:Anopheles gambiae


Alignment Length:574 Identity:110/574 - (19%)
Similarity:194/574 - (33%) Gaps:200/574 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 LGEILTDPGP----------RGRYMVAKEAISKGNVIFSERASCFVPL---EQLLICQQCAATLM 266
            ||| |..||.          .||.:||...|:...::|.:|.....|.   .:::.|..|.:.|.
Mosquito    51 LGE-LVPPGEPPWDIATFEGYGRGLVATRDIAVNELVFVDRPVLVGPRVNNYEVIFCASCCSILR 114

  Fly   267 SAPIPCPNCHQRVVYCSRKC--REAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIP----- 324
            ...:....|  |:..||| |  ....|:.|..|||                  |:.::.|     
Mosquito   115 RLQLCTGGC--RLPICSR-CDYSVGASSPHAAECA------------------LIQSWQPKDAGR 158

  Fly   325 YIRPHLQEMTSAKGMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQL 389
            |.:..|..:||.:|.                         ::|:.|::|              .|
Mosquito   159 YSKNILYALTSIRGF-------------------------LLSERDRSI--------------VL 184

  Fly   390 YLKEHTDFYDQFHSLPASIED---WQLIISALILRFAGQL--LANGHVGDALLGVGMEPKEFVML 449
            .::.|....:....:...::|   |.|......:|:..|:  :.|.:..:....|..|...    
Mosquito   185 QMEGHPPRKEMTTEIERLLKDGYFWNLDGEGPAVRYLRQVVNILNTNAFETSRIVADEENN---- 245

  Fly   450 QPELWQKPRHLKRGQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKFDG-CSVVNYAAKDILEG 513
            |.|:      :.|| |:.|.             :|.||.|.|::|..||| ..:..:|::.|.:|
Mosquito   246 QHEI------ILRG-LYILG-------------ALMNHCCRPNVRYVFDGELRMRVHASRPIKKG 290

  Fly   514 EEIFNCYTMDYRNSLKLQRSHPLKAIY-----KFECTCAKCTRTDPDQ--NYLSFHRYRCEKPNC 571
            |:|.|.|:       |:......:.|:     .|.|.|.:|  .||.:  .||.  ..:|.:.:|
Mosquito   291 EQIMNNYS-------KILWGSQHRIIHLCFSKNFLCCCDRC--KDPTEFGTYLG--ALKCVRESC 344

  Fly   572 RQEFLPDAKVQQNNLRWWLRCNAEKPITCTVCHELQHFAWYNEFLGLIGSSADSSKRQALFKAFD 636
                 |:.::...|           |:..:                                   
Mosquito   345 -----PEGRLLPVN-----------PLKIS----------------------------------- 358

  Fly   637 DLDKWLVDHHSLKRIMAEELVTACFYEIDGGTSLDEFEYEDLARIIRKQLEGIAAQCGDNSTEYI 701
              ..|..|..|||   .:.:..:...||.....::        ..|:::...|.....|:..:::
Mosquito   359 --SVWRCDRCSLK---MDNIKASKIQEIASRMIMN--------NAIKREASHIIDYLNDHIVKFL 410

  Fly   702 A---RMTYLWDIIAQKKCRTDRKELLEMKGKVDYLASEHREVF--LNYYNDFIE 750
            .   :.|....:.|.||.::|| .|:|::.|..| ..|..::.  |||...|::
Mosquito   411 LPTNQFTVELKLQAIKKIQSDR-PLVELREKEKY-CLEILDILQRLNYGECFVK 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 11/41 (27%)
SET <447..526 CDD:214614 22/79 (28%)
AgaP_AGAP000041XP_566389.3 SET <260..297 CDD:279228 15/36 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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