DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and SmydA-8

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_566389.3 Gene:SmydA-8 / 3289599 VectorBaseID:AGAMI1_001522 Length:522 Species:Anopheles gambiae


Alignment Length:573 Identity:111/573 - (19%)
Similarity:193/573 - (33%) Gaps:198/573 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 LGEILTDPGP----------RGRYMVAKEAISKGNVIFSERASCFVPL---EQLLICQQCAATLM 266
            ||| |..||.          .||.:||...|:...::|.:|.....|.   .:::.|..|.:.|.
Mosquito    51 LGE-LVPPGEPPWDIATFEGYGRGLVATRDIAVNELVFVDRPVLVGPRVNNYEVIFCASCCSILR 114

  Fly   267 SAPIPCPNCHQRVVYCSRKC--REAHSAIHKFECAAYR----KDILRLLGISHLALRLLLTYIPY 325
            ...:....|  |:..||| |  ....|:.|..|||..:    ||..|                 |
Mosquito   115 RLQLCTGGC--RLPICSR-CDYSVGASSPHAAECALIQSWQPKDAGR-----------------Y 159

  Fly   326 IRPHLQEMTSAKGMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLY 390
            .:..|..:||.:|.                         ::|:.|::|              .|.
Mosquito   160 SKNILYALTSIRGF-------------------------LLSERDRSI--------------VLQ 185

  Fly   391 LKEHTDFYDQFHSLPASIED---WQLIISALILRFAGQL--LANGHVGDALLGVGMEPKEFVMLQ 450
            ::.|....:....:...::|   |.|......:|:..|:  :.|.:..:....|..|...    |
Mosquito   186 MEGHPPRKEMTTEIERLLKDGYFWNLDGEGPAVRYLRQVVNILNTNAFETSRIVADEENN----Q 246

  Fly   451 PELWQKPRHLKRGQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKFDG-CSVVNYAAKDILEGE 514
            .|:      :.|| |:.|.             :|.||.|.|::|..||| ..:..:|::.|.:||
Mosquito   247 HEI------ILRG-LYILG-------------ALMNHCCRPNVRYVFDGELRMRVHASRPIKKGE 291

  Fly   515 EIFNCYTMDYRNSLKLQRSHPLKAIY-----KFECTCAKCTRTDPDQ--NYLSFHRYRCEKPNCR 572
            :|.|.|:       |:......:.|:     .|.|.|.:|  .||.:  .||.  ..:|.:.:| 
Mosquito   292 QIMNNYS-------KILWGSQHRIIHLCFSKNFLCCCDRC--KDPTEFGTYLG--ALKCVRESC- 344

  Fly   573 QEFLPDAKVQQNNLRWWLRCNAEKPITCTVCHELQHFAWYNEFLGLIGSSADSSKRQALFKAFDD 637
                |:.::...|           |:..:                                    
Mosquito   345 ----PEGRLLPVN-----------PLKIS------------------------------------ 358

  Fly   638 LDKWLVDHHSLKRIMAEELVTACFYEIDGGTSLDEFEYEDLARIIRKQLEGIAAQCGDNSTEYIA 702
             ..|..|..|||   .:.:..:...||.....::        ..|:::...|.....|:..:::.
Mosquito   359 -SVWRCDRCSLK---MDNIKASKIQEIASRMIMN--------NAIKREASHIIDYLNDHIVKFLL 411

  Fly   703 ---RMTYLWDIIAQKKCRTDRKELLEMKGKVDYLASEHREVF--LNYYNDFIE 750
               :.|....:.|.||.::|| .|:|::.|..| ..|..::.  |||...|::
Mosquito   412 PTNQFTVELKLQAIKKIQSDR-PLVELREKEKY-CLEILDILQRLNYGECFVK 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 11/44 (25%)
zf-MYND 258..298 CDD:460312 11/41 (27%)
SET <359..549 CDD:394802 40/200 (20%)
SmydA-8XP_566389.3 SET_SMYD <242..324 CDD:380997 28/112 (25%)

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