DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and SMYD1

DIOPT Version :9

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_938015.1 Gene:SMYD1 / 150572 HGNCID:20986 Length:490 Species:Homo sapiens


Alignment Length:407 Identity:87/407 - (21%)
Similarity:130/407 - (31%) Gaps:157/407 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 EILTDPGPRGRYMVAKEAISKGNVIFSERA---------------SCFVPLEQLLICQQCAATLM 266
            |:.|..| :||.:.|.:.....::||:|||               :||...|:|..|.||..   
Human    10 EVFTAEG-KGRGLKATKEFWAADIIFAERAYSAVVFDSLVNFVCHTCFKRQEKLHRCGQCKF--- 70

  Fly   267 SAPIPCPNCHQRVVYCSRKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQ 331
                    .|    ||.|.|::.....||.||:|    |.|...:.:..:||             
Human    71 --------AH----YCDRTCQKDAWLNHKNECSA----IKRYGKVPNENIRL------------- 106

  Fly   332 EMTSAKGMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAI-----DEELNYHILCANLLQLYL 391
               :|:.||       |...|.....|  ..|..|..|...:     :|:.:..:.....||.:.
Human   107 ---AARIMW-------RVEREGTGLTE--GCLVSVDDLQNHVEHFGEEEQKDLRVDVDTFLQYWP 159

  Fly   392 KEHTDFYDQFHSLPASIEDWQLIISALILRFAGQLLANGHV-----GDALLGVGMEPKEFVMLQP 451
            .:...|..|:                 |....|.:..||..     |...:|||:          
Human   160 PQSQQFSMQY-----------------ISHIFGVINCNGFTLSDQRGLQAVGVGI---------- 197

  Fly   452 ELWQKPRHLKRGQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKFDGCSVV----NY------- 505
                                       .|.|.|.||.|.|:       |:|:    |:       
Human   198 ---------------------------FPNLGLVNHDCWPN-------CTVIFNNGNHEAVKSMF 228

  Fly   506 ---------AAKDILEGEEIFNCYTMDYRNSLKLQRSHPLKAIYKFECTCAKCTRTDPDQNYLSF 561
                     |...|.||||:...| :|:.| :..:|...||..|.|:|||..|.:...|..:|..
Human   229 HTQMRIELRALGKISEGEELTVSY-IDFLN-VSEERKRQLKKQYYFDCTCEHCQKKLKDDLFLGV 291

  Fly   562 HRYRCEKPNCRQEFLPD 578
            .    :.|...||.:.:
Human   292 K----DNPKPSQEVVKE 304

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 10/39 (26%)
SET <447..526 CDD:214614 18/98 (18%)
SMYD1NP_938015.1 S-adenosyl-L-methionine binding. /evidence=ECO:0000250 17..19 0/1 (0%)
zf-MYND 52..90 CDD:307734 14/52 (27%)
SET <194..257 CDD:214614 21/107 (20%)