DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and AgaP_AGAP005253

DIOPT Version :9

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_001688544.1 Gene:AgaP_AGAP005253 / 1274967 VectorBaseID:AGAP005253 Length:638 Species:Anopheles gambiae


Alignment Length:649 Identity:135/649 - (20%)
Similarity:233/649 - (35%) Gaps:203/649 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KSLASMPADILQIFQKLALDLL-QDLEQPV----DRKGCAE----------RSKNLREEGNLMFK 78
            :||.....:::::|.:|..:|| |.:.:.|    |:...||          |:...|:..||  .
Mosquito     3 ESLQEKECNVVKLFHELWEELLKQRINELVHNQRDKDKVAEIIKREIEDFLRTFPFRDRFNL--H 65

  Fly    79 ESASGSSKDSVLKAC----------------RLYSEAVFEAENAVEELSLAFANRGIALQEYGYY 127
            ..|..::|....:.|                :.|:|::..:|...|..:||:.||.....::|.|
Mosquito    66 PDAKDNAKALAARNCGNERFAPSIGEYMESLQHYNESIAYSEQGSETRALAYGNRSAVCLKFGLY 130

  Fly   128 REAYDDCSNALECGYPERLRHKVIMRQAFCAWKLKKIASLEEHLDYLGQLQLKESFEQQLEDLKQ 192
            .|..::...|....||.:|..|:..|:.:                      :|...|:..|:...
Mosquito   131 EECLENIRLARASNYPMQLADKLNKREQY----------------------VKRCIEEDAEEFSD 173

  Fly   193 KLELLKNQPREQETQGKVVDKSLGEILTDPGPR------------------------GRYMVAKE 233
            |:         ..|.|:...::.|.    |.|:                        ||::|..:
Mosquito   174 KV---------MHTPGQYRPRNSGY----PAPKLSYEAHANVPQLVKCVELRQNSEFGRHLVTTQ 225

  Fly   234 AISKGNVIFSER--ASCFVPLEQLLICQQCAATLMSAPIPCPNCHQRVVYCSRKCRE-AHSAIHK 295
            .:..|:|:..|:  ||.....|:...|..|........|||..| ...:|||.:|.: |:...|:
Mosquito   226 HLKAGDVLLIEKPYASMLNDKERYKRCAFCHNEDTFTLIPCEGC-TLTMYCSDECMDKAYKQYHR 289

  Fly   296 FECAAYRKDILRLLGI---SHLALRLLLTYIPYIRPHLQEMTSAKGMWEEIMNLSRKPEESENAP 357
            :||...| |..|:.|.   ..:.||::.|.|......|:..|:         :|:...|...|| 
Mosquito   290 YECGVLR-DCWRIAGRLVGGIVGLRMVATAIASFEQDLEGWTN---------HLNALDETKVNA- 343

  Fly   358 EYLRSLRMVSQLDQAIDEEL--NYHILCAN-----------------LLQLYLKEHTDFYDQFHS 403
                   .....::..|.::  ..|:|..|                 ::...|.|.||......|
Mosquito   344 -------FTVDWNKVTDSDIYDTVHVLATNQKRRSREDLAVLMFFTSIVHRLLLERTDLGPFCES 401

  Fly   404 LPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRGQL--- 465
            .|...:    ::..|:||.....|.|              |:.|.          |::|.:.   
Mosquito   402 SPTRSK----LLFDLLLRHWQTSLIN--------------KKQVY----------HVQRSECQDE 438

  Fly   466 ------HNLS---------HSDPITAINL-PYLSLCNHACEPSIRT--KFDG-CSVVNYAAKDIL 511
                  :|.:         :||.:.||.: |..|:.||:|.|::..  ..|| |:.|  |.:.|.
Mosquito   439 EDEYYEYNYAGYDSDDEEEYSDEMHAIAVYPLFSMVNHSCIPNVAPIHLLDGRCAFV--ATRPIA 501

  Fly   512 EGEEIFNCY---TMDYRNSLKLQRSHPLKAIYKFECTCAKC---------TRTDPDQNYLSFHR 563
            .||::|:.|   :||:..|.::   ..|:..|.|:|.||.|         ..|..:.|:|...|
Mosquito   502 AGEQLFDVYAFASMDFDRSFRI---FCLRKSYYFKCRCAVCESFSYVDVRNMTPRETNFLRLLR 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 12/40 (30%)
SET <447..526 CDD:214614 26/103 (25%)
AgaP_AGAP005253XP_001688544.1 TPR_11 73..142 CDD:290150 14/68 (21%)
zf-MYND 252..292 CDD:280009 12/40 (30%)
SET <472..507 CDD:279228 13/36 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1278034at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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