DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and Smyd4-2

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_061519376.1 Gene:Smyd4-2 / 1272955 VectorBaseID:AGAMI1_014187 Length:669 Species:Anopheles gambiae


Alignment Length:657 Identity:157/657 - (23%)
Similarity:245/657 - (37%) Gaps:180/657 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NENYKDEFETFKSLASMPADILQ-IFQKLALD------LLQD----------LE--QPVDRKGCA 63
            ||.|:...|.|   ....|..|| ::||:..|      :.:|          ||  :||.|...|
Mosquito    28 NEFYQSVAENF---TGKSARWLQDVYQKVPSDKERLRLIYEDPVVAYEVQGTLEHVEPVFRGKDA 89

  Fly    64 ERSKNLREEGNLMFKESASGSSKDSVLKACRLYSEAVFEA-----ENAVEE---LSLAFANRGIA 120
            :.|...||:...:..|:   ..:.:::.||    :||..|     :..:::   |:||...|...
Mosquito    90 KFSWQRREQALKLLGEN---KLQQALIIAC----QAVMRAPGQGVDRYIDKGLTLALALWTRAEV 147

  Fly   121 LQEYGYYREAYDDCSNALECGYPERLRHKVIMRQAFC------------AWKLKKIASLEEHLDY 173
            .......:.|..|...|.:||.|.:.......|.|.|            |.||  ...|..|.:|
Mosquito   148 FIRQLDGKRALQDLQLAAKCGLPVKQNADYYARVAKCYALIGENGRAEVAAKL--FHQLSGHNNY 210

  Fly   174 -LGQLQLKESFEQQLEDLKQKLELLKNQPREQETQGKVVDKSL---------GEIL--------- 219
             ||:||      :.||||:    :||     |||....|::||         ||||         
Mosquito   211 ALGRLQ------EDLEDLR----VLK-----QETPSVEVERSLPKLAGEGENGEILGASSKIKLA 260

  Fly   220 -TDPGPRGRYMVAKEAISKGNVIFSE--RASCFVPLEQLLICQQCAATLMSAPIPCPNCHQRVVY 281
             :...|||||:||...:..|.||.:|  .|:|.........|..|.:.|: ||:.||:| ..|.:
Mosquito   261 GSKEDPRGRYVVAAADLGPGEVILTEPAYAACLHAKYYGTHCSACFSRLI-APVACPDC-CGVAF 323

  Fly   282 CSRKCRE-AHSAIHKFECAAYRKDILRLLGIS---HLALRLLLTYIPYIRPHLQEMTSAKGMWEE 342
            ||..||: |.:..|:|||...  |::...|:|   |:|||               |.:..|..|:
Mosquito   324 CSVACRDKACATYHRFECQYL--DLMIGSGMSILCHVALR---------------MVTQAGTPEK 371

  Fly   343 IMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFHSLPAS 407
            ::      ||.    :.||.........:..::.....::.|.||:...|  .:|:.:..:....
Mosquito   372 VL------EEG----KMLRDTFCAHTEHRDPEDHFKRTLMTAFLLRCLQK--AEFFGRRTTEAPE 424

  Fly   408 IEDWQLIISALILRFAGQLLANGH-------VGD--------ALLGVGMEPKEFVMLQPELWQKP 457
            ..:.:|.:.|::|.....|..|.|       .|:        ..:|||                 
Mosquito   425 PTEQELEVGAVLLSALQSLQFNAHEVYETRITGEHRFDTAKVQYIGVG----------------- 472

  Fly   458 RHLKRGQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCYTM 522
              :.||                  .|:.||.|.|.:...|.|.:::.:.::.|..|..:...|..
Mosquito   473 --IYRG------------------ASMFNHECYPGVTRTFLGTAMILHTSRPIPAGAVVPENYGP 517

  Fly   523 DYRNSLKLQRSHPLKAIYKFECTCAKCTRTDPDQNYL-SFHRYRCEKPNCRQEFLPDAKVQQNNL 586
            .:....|..|...|::.|.|:|.|..|....|..:.| :..|.||....|.......:|..|.| 
Mosquito   518 HFMRQPKAIRQRNLRSRYWFKCDCRACAEDWPQMDKLPAKPRLRCPTEGCGNALAYPSKPSQRN- 581

  Fly   587 RWWLRCN 593
               .:||
Mosquito   582 ---AKCN 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 16/46 (35%)
zf-MYND 258..298 CDD:460312 16/40 (40%)
SET <359..549 CDD:394802 36/204 (18%)
Smyd4-2XP_061519376.1 None

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