DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and LOC1272665

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_559081.4 Gene:LOC1272665 / 1272665 VectorBaseID:AGAMI1_004335 Length:511 Species:Anopheles gambiae


Alignment Length:567 Identity:131/567 - (23%)
Similarity:191/567 - (33%) Gaps:178/567 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 GRYMVAKEAISKGNVIFSERASCFVPLEQLLICQQCAATLMSAPIPC------PNCHQRVVYCSR 284
            ||::||...|..|.:|.:|......|.....|  .|...|..|...|      |.|..    |||
Mosquito    18 GRFLVANRDIKPGELILAEDPIVVGPYWDADI--SCLGCLGPASRTCRVCLKGPLCRD----CSR 76

  Fly   285 KCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQEMTSAKGMWEEIMNLSRK 349
                 |..:   ||:.|.:       .|.|....|..:...|.|            ...:.|.|.
Mosquito    77 -----HDPV---ECSFYEQ-------ASKLNKNFLFDHFNIITP------------LRCLLLYRS 114

  Fly   350 PEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFHSLPASIEDWQLI 414
            ..:     :|...:.|.|..:...|.|: :||....:::..|.| .||        ..|:|    
Mosquito   115 DRD-----KYNEMMAMESHFESRRDTEI-WHIHNQYVVEPMLNE-KDF--------QQIDD---- 160

  Fly   415 ISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRG-------QLHNLSHSD 472
                 |...|:||      ..:.|: ::...|.:             ||       |::||:.. 
Mosquito   161 -----LTVTGELL------QRICGI-LDVNTFEI-------------RGNMDSQGVQMNNLARG- 199

  Fly   473 PITAINLPYLSLCNHACEPSIRTKFDGCSVVN-YAAKDILEGEEIFNCYTMDYRNSLKLQRSHPL 536
                 ..|..||..|.|:.:.....||.|.:. |::..|..||.::..||....::.:.| :|..
Mosquito   200 -----LYPKTSLMTHNCQTNTLIAVDGMSKLRLYSSIGIKAGELLYYNYTRVLFSTFERQ-THLR 258

  Fly   537 KAIYKFECTCAKCTRTDP---------------DQNYLSFH----RYRCEKPNCRQEFLPDAKVQ 582
            |..| |.|.||:|  :||               |.....||    ::.|  ..|..: ||...|.
Mosquito   259 KGKY-FICNCARC--SDPTELGTHLSSLKCTACDDGLCVFHTETPKWEC--LTCGHQ-LPREYVN 317

  Fly   583 QNNLRWWLRCNAEKPITCTVCHELQHFAWYNEFLGLIGSSADSSKRQALFKAFDDLDKWLVDHHS 647
            |      :.|.|...|:                     |.|..|:.  |.|......|.|..|||
Mosquito   318 Q------IMCEARDDIS---------------------SCALDSRN--LEKVIGKHSKTLNPHHS 353

  Fly   648 L----KRIMAEELVTACF-YEIDG---GTSLDEFEY-EDLARIIRKQLEGIAAQCGDNSTEYIAR 703
            |    |:.:|.||...|. |:|..   .....:.|. |::.:|:|....|::...|....||.|.
Mosquito   354 LVLEAKQSLAGELRNMCMSYDIHNVPRQALKRKLELCEEMLQILRVLDPGVSRLTGIALYEYHAA 418

  Fly   704 MTYL----WDIIAQKKCRTDRKELLE--------MKGKVDYLASEHR 738
            :..|    .||...|     ..||||        :|..:..|..|||
Mosquito   419 LVDLSRRNHDIGEIK-----TPELLERLKLSEAALKEAIGMLVFEHR 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 8/25 (32%)
zf-MYND 258..298 CDD:460312 10/45 (22%)
SET <359..549 CDD:394802 46/197 (23%)
LOC1272665XP_559081.4 None

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