DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and LOC1271020

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_061514761.1 Gene:LOC1271020 / 1271020 VectorBaseID:AGAMI1_009640 Length:337 Species:Anopheles gambiae


Alignment Length:371 Identity:78/371 - (21%)
Similarity:138/371 - (37%) Gaps:113/371 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 VYCSRKC-REAHSAIHKFECAAYRKDILRLLGISH-LALRLLLTYI-------PYIRPHLQEMTS 335
            :|||.:| .:|:...|::||...| |:..:||||. :|||::...|       ..::.||..:..
Mosquito     1 MYCSEECISKAYGKYHRYECGVLR-DLWTVLGISGVIALRMIAIAITTFDNDLEKLKDHLDALDE 64

  Fly   336 AK--GM---WEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCAN---------- 385
            :|  |.   |::     ..|::..|                      ..|:||.|          
Mosquito    65 SKVDGFTMDWKK-----ATPQDVFN----------------------TVHVLCTNQERRNIKELA 102

  Fly   386 -------LLQLYLKEHTDFYDQFHSLPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEP 443
                   ::..:|.|.|:......:.|.:.:    ::..||||:......|..:...:       
Mosquito   103 GLTFFTVVMHNHLLEWTELGPACEANPTASK----LLLDLILRYLQITECNYKLLTCI------- 156

  Fly   444 KEFVMLQPELWQKPRHLKRGQLHNLSHSDPITAIN-LPYLSLCNHACEPSIRTKF--DG-CSVVN 504
                                ::.|.:..|...|.: .|.:|:.||:|.|::|...  || |:|: 
Mosquito   157 --------------------KITNRNPEDETFATSCYPLISMLNHSCAPNVRRLILPDGRCAVI- 200

  Fly   505 YAAKDILEGEEIFNCYTMDYRNSLKLQRSHPLKAIYKFECTC---------AKCTRTDPDQNYLS 560
             ....:.:|.::|:.|.:|:....:.:|...|...|:|:|||         :||.....|....:
Mosquito   201 -VIHTVAKGGQLFDNYEVDHWTKDRKKRQIILPFFYQFQCTCDACIYDYPSSKCVEESNDGTKAA 264

  Fly   561 FHRYRCEKPNCRQEFLPDAKVQQN---NLRWWLRCNAE---KPITC 600
            |.....:.....|.|  |.|...|   .||.:|....:   :||.|
Mosquito   265 FFIDFLQICGAAQSF--DKKKLLNMMLKLRSFLNVTPQPYAEPIVC 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802
zf-MYND 258..298 CDD:460312 6/18 (33%)
SET <359..549 CDD:394802 38/219 (17%)
LOC1271020XP_061514761.1 None
Blue background indicates that the domain is not in the aligned region.

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