DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and AgaP_AGAP011238

DIOPT Version :9

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_309407.4 Gene:AgaP_AGAP011238 / 1270688 VectorBaseID:AGAP011238 Length:497 Species:Anopheles gambiae


Alignment Length:579 Identity:132/579 - (22%)
Similarity:216/579 - (37%) Gaps:156/579 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LARTFSQ------QNELITLNENYKDEFETFKSLASMPADILQIF---QKLALDLLQDLEQPVDR 59
            :.:.|.|      |..:|...:|..|:......:.....|.|..|   ::|.|       || |.
Mosquito    12 VTKLFGQLWEETLQQRIIESTQNQPDDDRVAAIIKCKIDDFLCRFPFHERLQL-------QP-DA 68

  Fly    60 KGCAERSKNL--REEGNLMFKESASGSSKDSVLKACRLYSEAVFEAENAVEELSLAFANRGIALQ 122
            |   :.:|.|  |..||.:|    :...::..|:|.|.|:|::..:....|..:||:.||.....
Mosquito    69 K---DNAKALAARVLGNELF----ALPMEEKYLQALRYYNESISYSAQGSETRALAYGNRSAVCL 126

  Fly   123 EYGYYREAYDDCSNALECGYPERLRHKVIMRQAFCAWKLKKIASLEEHLDYLGQLQLKESFEQQL 187
            ::|.|:|..::...|....||.||..|:..|              |:|:.               
Mosquito   127 KFGLYQECLENIRLARASNYPARLADKLNKR--------------EQHVK--------------- 162

  Fly   188 EDLKQKLELLKNQP-----REQETQGKVVDKSLGEILTDPGPR---------------------- 225
                   ..:::.|     |.:.|.||...:|.|.    |.|:                      
Mosquito   163 -------RCIQHDPPVFPDRFKHTPGKYRPRSSGH----PAPKLSYEAHANVPQLVKCVELRQDS 216

  Fly   226 --GRYMVAKEAISKGNVIFSER--ASCFVPLEQLLICQQCAATLMSAPIPCPNCHQRVVYCSRKC 286
              ||::|..:.:..|:|:..|:  |:..:.:|:.:.|..|........|||..| ...:|||.:|
Mosquito   217 EFGRHLVTTQHLKAGDVLLIEKPYANLLIDVERHVRCAFCQNEDRFTLIPCEGC-TVTMYCSEEC 280

  Fly   287 RE-AHSAIHKFECAAYRKDILRLLGISHL-----ALRLLLTYIPYIRPHLQEMTSAKGMWEEIMN 345
            |: ||...|::||...| |..|::|  ||     .||.:.|.|......|:.       |.:  :
Mosquito   281 RDKAHKQYHRYECGVLR-DCWRIVG--HLFGGMVGLRTVATAIASFDQDLEG-------WND--H 333

  Fly   346 LSRKPEESENAPEYLRSLRMVSQLDQAID-----------EELNYHILCANLLQLYLKEHTDFYD 399
            |:...|.:.||.........||.:...:.           ::|...|..|:::...|.|.|||..
Mosquito   334 LNTLDETNVNAFTMDWKNATVSDIYDTVHVLATNQKRRSRKDLAELIFFASIVHRLLLERTDFGP 398

  Fly   400 QFHSLPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRGQ 464
            ...|.|...:    ::..|:||         ||..:|:........|.....|  .||.|.:   
Mosquito   399 LCESNPIRSK----LLFDLLLR---------HVQTSLINKKRLNDYFDYDSDE--GKPTHFE--- 445

  Fly   465 LHNLSHSDPITAINLPYLSLCNHACEPSIR--TKFDG-CSVVNYAAKDILEGEEIFNCY 520
                  ..|......|..|:.||:|.|::.  ...|| |::|  |.:.|..||::|:.|
Mosquito   446 ------ERPHAMAVYPLSSMLNHSCVPNVAPINLLDGRCAIV--AIRPIAAGEQLFDNY 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 14/40 (35%)
SET <447..526 CDD:214614 21/77 (27%)
AgaP_AGAP011238XP_309407.4 TPR_11 73..143 CDD:290150 20/73 (27%)
zf-MYND 253..293 CDD:280009 14/40 (35%)
SET <420..497 CDD:279228 23/90 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1278034at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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