DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and LOC1270662

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_309378.3 Gene:LOC1270662 / 1270662 VectorBaseID:AGAMI1_006410 Length:250 Species:Anopheles gambiae


Alignment Length:269 Identity:65/269 - (24%)
Similarity:106/269 - (39%) Gaps:70/269 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TLNEN-------------YKDEFETFKSLASMPADILQIFQKLALDLLQD-----------LEQP 56
            ||||.             :...::||...:.:.|.:..:..|..::||..           .||.
Mosquito    14 TLNETQLVTCRAKNKRVLFAKMYDTFLKPSILQAKLNNLSAKETVELLAPKIGEWIRNYSVCEQL 78

  Fly    57 VDRKGCAERSK--NLREEGNLMFKESASGSSKDSVLKACRLYSEAVFEAENAVEELSLAFANR-G 118
            ..|....|.:|  .||.|||.||..:..     ..::|.:||:|::..:|....|.|||:||| .
Mosquito    79 NLRNDLKENAKATQLRSEGNKMFHPNVK-----RYIEAIKLYNESITFSEKGSAERSLAYANRSN 138

  Fly   119 IALQEYGYYREAYDDCSN----ALECGYP-ERL--RHKVIMRQAFCAWKLKKIASLEEHLDYLGQ 176
            |.|:.:     .::||..    |.|..|. |:|  |.|.: :.|....:.|..:|.:...|.:.:
Mosquito   139 ICLKMH-----RFEDCLENIRLARESNYSGEKLNQREKEV-KNALAKARNKNASSSKVSPDVVEE 197

  Fly   177 LQLKESFEQQLEDLKQKLELLKNQPREQETQGKVVDKSLGEILTDPGPRGRYMVAKEAISKGNVI 241
            .:|....::....:...|||.||:                       ..||::||...:..|:|:
Mosquito   198 PELSYPVKENAPQVANCLELRKNE-----------------------EYGRHVVATRKLKVGDVV 239

  Fly   242 FSER--ASC 248
            ..||  |.|
Mosquito   240 MIERLVAIC 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 10/34 (29%)
zf-MYND 258..298 CDD:460312
SET <359..549 CDD:394802
LOC1270662XP_309378.3 None
Blue background indicates that the domain is not in the aligned region.

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