DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and AgaP_AGAP011270

DIOPT Version :9

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_309376.4 Gene:AgaP_AGAP011270 / 1270660 VectorBaseID:AGAP011270 Length:341 Species:Anopheles gambiae


Alignment Length:358 Identity:73/358 - (20%)
Similarity:144/358 - (40%) Gaps:71/358 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LKACRLYSEAVFEAENAVEELSLAFANRGIALQEYGYYREAYDDCSNALECGYP-ERL--RHKVI 151
            ::|.:||:|::..:|....|.:||:.||.....:...:.|..::...|.|..|| |:|  |.|.:
Mosquito    21 IQAIKLYNESIAFSEKGSTERALAYVNRSNICLKMQRFEECLENIRLARESNYPGEKLIQREKEV 85

  Fly   152 MRQAFCAWKLKKIASLEEHLDYLGQLQLKESFEQQLEDLKQKLELLKNQPREQETQGKVVDKSLG 216
             :.|....:.|..:|.:...|.:.:.:|..:.::....:...|||.||:                
Mosquito    86 -KNALAKARNKNASSSKASPDVVEEPELSYAAKENAPQVANCLELRKNE---------------- 133

  Fly   217 EILTDPGPRGRYMVAKEAISKGNVIFSERASCFVPLE--QLLICQQCAATLMSAPIPCPNCHQRV 279
                   ..||::|....:..|:|:..||....|..:  :.:.|..|........|||..| ...
Mosquito   134 -------EYGRHVVTTRKLKVGDVVMIERPFVTVLKDSFRYVRCDFCHEERPFTLIPCEGC-TMA 190

  Fly   280 VYCSRKC-REAHSAIHKFECAAYRKDILRLL-GISHLALRLLLTYI-------PYIRPHLQEMTS 335
            :|||.:| .:|::..|::||...| |:..:. .:..:|:|::...|       ..::.||..:..
Mosquito   191 MYCSEECLSKAYNNYHRYECGLLR-DLWEVFEAVPLIAIRMIAIAIATFDNNPEALKDHLDALDE 254

  Fly   336 A----------KGMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDE-ELNYHILCANLLQL 389
            :          |...::|.|                ::.:::...:..|. .:.::|..|.:|..
Mosquito   255 SNVNGFTMDWNKATQQDIFN----------------TVHVLTTNQERRDSFFVAFYIFNATILHT 303

  Fly   390 YLKEHTDFYDQFHSLPASIEDWQLIISALILRF 422
            .:.|.|:......:.||:    ...:..||||:
Mosquito   304 LVLERTELEPVCEANPAT----NKFLLDLILRY 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 12/40 (30%)
SET <447..526 CDD:214614
AgaP_AGAP011270XP_309376.4 TPR_11 <18..70 CDD:290150 12/48 (25%)
TPR repeat 41..71 CDD:276809 6/29 (21%)
zf-MYND 170..210 CDD:280009 12/40 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D30377at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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