DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nt5c and AT5G48960

DIOPT Version :10

Sequence 1:NP_610499.2 Gene:Nt5c / 35984 FlyBaseID:FBgn0033426 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_199707.2 Gene:AT5G48960 / 834954 AraportID:AT5G48960 Length:642 Species:Arabidopsis thaliana


Alignment Length:496 Identity:136/496 - (27%)
Similarity:223/496 - (44%) Gaps:75/496 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 PDAVFACNELDLSEVQVYGFDYDYTLACYKPIL-EDLLYNLAREMLVKRFRYPEDILQLEYEPNF 160
            |..:|....|:|..:...|:|.||||..|..:. |...|:...|.| |...:|.|  .|.::|..
plant   162 PRGIFCSRTLNLRSISAIGYDMDYTLMHYNVMAWEGKAYDYCMENL-KSMGFPVD--GLAFDPEL 223

  Fly   161 AVRGLHYDVEKGLLVKLDSFLQLQLGSVYRGR--TKVEADE-VLKLYHNRLLPIAYVEGPNNSYR 222
            .:|||..|.|||.|||.|.|     |.|.|..  ||:.::: |.::|...|:.:           
plant   224 VIRGLMIDKEKGNLVKADRF-----GYVKRAMHGTKMLSNKAVSEIYGRELVDL----------- 272

  Fly   223 HNTNSKMVQLADLFSVPEMCLLCNVIEYF-------ERNRIDYNPEIVFHDTRTAMGSCH--PIM 278
             ...|:...|...|||.|......:::..       :...:||..  ::.....|:...|  ..:
plant   273 -RNQSRWEFLNTFFSVSEALAYAQMVDRLDDGFISADLGTLDYKG--LYKAVAKALFRAHVEGQL 334

  Fly   279 HGKVMRNTEKYIERNPKLVKFFEKLQQAGKNLFLVTNSPYSFVNCGM-----SFLVG-ANWRDFF 337
            ..::|...|.::|.:|:|.......::|||.|.|:|||.|.:.:..|     .||.. .:|||.|
plant   335 KSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMKHSFNKFLPNDMDWRDLF 399

  Fly   338 DVVIVQARKPKFFTDESRPIRLFDERTQSHLWDRVFKLEKGKIYYEGSVRQLQELKGWRGHSVLY 402
            |:|||.||||:|| ..|.|  |::..|...|....||.|.|.:|..||.:.::......|..:||
plant   400 DMVIVSARKPEFF-QMSHP--LYEVVTGEGLMRPCFKAETGGLYSGGSAQMIESSLNVHGDEILY 461

  Fly   403 FGDHPYSDLADVTLKHSWRTGAIISELAHE--------------IKTLNRKD-----FKMSANWL 448
            .|||.|:|::...:...|||..|..||..|              |:.:|:|:     |......|
plant   462 VGDHIYTDVSVSKVHLRWRTALICRELEEEYMALIGSRGHREELIELINQKEVVGDLFNQLRLAL 526

  Fly   449 QMLT-----QLIEDTQDDDSEAAQ-----ICLKEWMEERDQLRNKTK-NVFNEQFGSVFRT-YHN 501
            |..:     |.:..|..||.|..:     :.:.:.::::..|..:|. .:||:::|.:.|. ..:
plant   527 QRRSKGRPAQTLAATNLDDQELTETMQKLLIVMQRLDDKIGLMLETDGELFNKRWGFLSRAGLWD 591

  Fly   502 PTYFSRRLFRFADIYTSDITNLLKFSTTHTFYPRRGVMPHE 542
            .::..|::.::||||||.::|.|.::....|..:...:.|:
plant   592 KSHLMRQIEKYADIYTSRVSNFLNYTPFMYFRSQEQSLAHD 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nt5cNP_610499.2 5_nucleotid 108..544 CDD:461733 133/485 (27%)
AT5G48960NP_199707.2 5_nucleotid 173..634 CDD:461733 133/485 (27%)

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