DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nt5c and LOC100124988

DIOPT Version :10

Sequence 1:NP_610499.2 Gene:Nt5c / 35984 FlyBaseID:FBgn0033426 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001096388.1 Gene:LOC100124988 / 100124988 XenbaseID:XB-GENE-29087263 Length:583 Species:Xenopus tropicalis


Alignment Length:528 Identity:223/528 - (42%)
Similarity:323/528 - (61%) Gaps:25/528 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PISSSLSP-SPCKPNYSFEARAFASDAGASAPAATAQISHPKTVSDFQKLHEATKKKFQSKKLPS 93
            |.:|.:.| :|.:.:...........:||.||.  .:.|...|............:..:.|||..
 Frog    41 PAASQVPPVTPTQTSPGNPTAPHLHPSGAPAPG--RRFSSSSTAPKIDNKSFLWSRYGEMKKLVQ 103

  Fly    94 DVHP---------DAVFACNELDLSEVQVYGFDYDYTLACYKPILEDLLYNLAREMLVKRFRYPE 149
            |:.|         ..::|.||:.|.::::||||||||||.|...|..:::|.||::|:::::||:
 Frog   104 DLLPPGVCNLLNSSTIYANNEVCLGDIEIYGFDYDYTLALYSSALHSMIFNTARDILIEQYKYPD 168

  Fly   150 DILQLEYEPNFAVRGLHYDVEKGLLVKLDSFLQLQLGSVYRGRTKVEADEVLKLY---HNRLLPI 211
            .|.:.||.|||||||||||:.||||:|:|::..::||:.|||...|..:||::||   |:  :|:
 Frog   169 AIRKYEYLPNFAVRGLHYDINKGLLMKIDAYHYIELGTAYRGLKPVPDEEVMELYQGTHH--IPL 231

  Fly   212 AYVEGPNNSYRHNTNSKMVQLADLFSVPEMCLLCNVIEYFERNRIDYNPEIVFHDTRTAMGSCH- 275
            ..|.|     .:.....:.|..|:||:||:.||....::|..|.|||:|..::.|...|:...| 
 Frog   232 HQVSG-----FYGKGPAVKQFMDIFSLPEITLLAVANDFFLTNDIDYDPIHLYKDVTDAIRDVHI 291

  Fly   276 -PIMHGKVMRNTEKYIERNPKLVKFFEKLQQAGKNLFLVTNSPYSFVNCGMSFLVGANWRDFFDV 339
             ..|:..:|::.||||.|..:......:|...||.|||:||||:|||:.||.::||.:|||||||
 Frog   292 KGFMYKWIMQDLEKYILRGDETYAVLHRLASQGKKLFLITNSPFSFVDKGMKYMVGKDWRDFFDV 356

  Fly   340 VIVQARKPKFFTDESRPIRLFDERTQSHLWDRVFKLEKGKIYYEGSVRQLQELKGWRGHSVLYFG 404
            |||||.||.||.|..:|.|..|:..... ||::..||||::|.:|::.....|.||||..|||||
 Frog   357 VIVQADKPHFFNDCIKPFRRLDKNGDLK-WDKITSLEKGQVYKQGNLFDFIRLTGWRGSKVLYFG 420

  Fly   405 DHPYSDLADVTLKHSWRTGAIISELAHEIKTLNRKDFKMSANWLQMLTQLIEDTQDDDSEAAQIC 469
            ||.||||||:.|:|.||||||:.||..|.|.:|.:.:..|..|:|.||.|:|..|:.....:|..
 Frog   421 DHLYSDLADLMLRHGWRTGAIVPELETETKIVNTEQYSQSLTWMQALTGLLERMQNFRDPGSQQV 485

  Fly   470 LKEWMEERDQLRNKTKNVFNEQFGSVFRTYHNPTYFSRRLFRFADIYTSDITNLLKFSTTHTFYP 534
            |::||:||.:||..|||:||.||||:|||.||||||||||.||:|:|.:.|:.||.:..::||:|
 Frog   486 LQDWMKERQELRAVTKNLFNPQFGSIFRTCHNPTYFSRRLCRFSDLYMASISCLLNYDLSYTFFP 550

  Fly   535 RRGVMPHE 542
            ||..:.||
 Frog   551 RRTPLQHE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nt5cNP_610499.2 5_nucleotid 108..544 CDD:461733 205/440 (47%)
LOC100124988NP_001096388.1 PHA03247 <2..84 CDD:223021 10/44 (23%)
5_nucleotid 127..560 CDD:461733 205/440 (47%)

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