DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nt5c and nt5dc3

DIOPT Version :10

Sequence 1:NP_610499.2 Gene:Nt5c / 35984 FlyBaseID:FBgn0033426 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_012813874.1 Gene:nt5dc3 / 100124894 XenbaseID:XB-GENE-940463 Length:553 Species:Xenopus tropicalis


Alignment Length:546 Identity:235/546 - (43%)
Similarity:333/546 - (60%) Gaps:33/546 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PIVSALLRQNVLLRAGGVLRSWDPISSSLSPSPCKPNYSFEARAFASDAGASAPAATAQISHPKT 71
            |::|...|..:..|        ..::....|:.||..:....|:.|           |..:.|:|
 Frog     6 PLLSRWCRATLAAR--------KKLTHKAEPAFCKGIWWQCVRSLA-----------ALSNGPET 51

  Fly    72 -------VSDFQKLHEATKKKFQSKKLPSDVHPDAVFACNELDLSEVQVYGFDYDYTLACYKPIL 129
                   .|:::::..:..::.......|.::|||:||.||:.|.:::|||||||||||.|...|
 Frog    52 GDMRGYLTSNYKEVKRSINEELVPSVSSSLLNPDAIFANNEMSLEDIEVYGFDYDYTLAFYSKDL 116

  Fly   130 EDLLYNLAREMLVKRFRYPEDILQLEYEPNFAVRGLHYDVEKGLLVKLDSFLQLQLGSVYRGRTK 194
            ..|::|.||::|:...|||::|...||:||||:|||||||.|.||:|:|||..:|||:||||...
 Frog   117 HTLIFNTARDLLINEHRYPKEIRSYEYDPNFAIRGLHYDVHKALLMKIDSFHYIQLGTVYRGLNV 181

  Fly   195 VEADEVLKLYHNRLLPIAYVEGPNNSY-RHNTNSKMVQLADLFSVPEMCLLCNVIEYFERNRIDY 258
            |...||:::|....:|:   |..::.| :.:..:.:.|..|:||:|||.||..|.|||.:|.|||
 Frog   182 VPDSEVIEMYEGSHVPL---EQMSDFYGKSSEGNTLKQFMDIFSLPEMTLLSCVNEYFLKNNIDY 243

  Fly   259 NPEIVFHDTRTAMGSCH--PIMHGKVMRNTEKYIERNPKLVKFFEKLQQAGKNLFLVTNSPYSFV 321
            .|..::.|.:.|:...|  .|::..|..:.|:||....:......||...||.:||:||||.|||
 Frog   244 EPVHLYKDVKEAIRDVHVKGILYRAVEADIERYICYGERTQAVLSKLANLGKKMFLITNSPSSFV 308

  Fly   322 NCGMSFLVGANWRDFFDVVIVQARKPKFFTDESRPIRLFDERTQSHLWDRVFKLEKGKIYYEGSV 386
            |.||:|:||.:|||.||||||||.||.||.|:.||.|...|| ...|||::..||||:.|.:|::
 Frog   309 NKGMNFIVGKDWRDLFDVVIVQADKPNFFNDKRRPFRKVAER-GILLWDKIHHLEKGQTYKQGNL 372

  Fly   387 RQLQELKGWRGHSVLYFGDHPYSDLADVTLKHSWRTGAIISELAHEIKTLNRKDFKMSANWLQML 451
            .:..:|.||||..|||||||.||||||:||||.|||||||.||..||:.:|...:..:..|||.|
 Frog   373 FEFLKLTGWRGSKVLYFGDHIYSDLADLTLKHGWRTGAIIPELKSEIEIMNTSHYITTVTWLQGL 437

  Fly   452 TQLIEDTQDDDSEAAQICLKEWMEERDQLRNKTKNVFNEQFGSVFRTYHNPTYFSRRLFRFADIY 516
            |.|:|..|......:|:.|::|::||.::|:..:.:||.||||:|||.||||||.|||.||||||
 Frog   438 TGLLERMQVYRDAESQMVLQDWIKERQEMRDLARKMFNRQFGSIFRTDHNPTYFLRRLSRFADIY 502

  Fly   517 TSDITNLLKFSTTHTFYPRRGVMPHE 542
            ...::.||.:...|||||:|..:.||
 Frog   503 MESLSCLLNYDLHHTFYPKRTPLQHE 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nt5cNP_610499.2 5_nucleotid 108..544 CDD:461733 214/438 (49%)
nt5dc3XP_012813874.1 5_nucleotid 95..530 CDD:461733 214/438 (49%)

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