DRSC/TRiP Functional Genomics Resources

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Protein Alignment f9a and flz

DIOPT Version :9

Sequence 1:NP_878288.2 Gene:f9a / 359826 ZFINID:ZDB-GENE-030714-2 Length:503 Species:Danio rerio
Sequence 2:NP_001137622.1 Gene:flz / 35902 FlyBaseID:FBgn0286782 Length:1693 Species:Drosophila melanogaster


Alignment Length:394 Identity:122/394 - (30%)
Similarity:194/394 - (49%) Gaps:74/394 - (18%)


- Green bases have known domain annotations that are detailed below.


Zfish   162 TCEPI----VKFPCGKTS-------KPAV-KTYGTASVTNTTAQFS--------NMTVKST---S 203
            |.:|:    .|.|..|||       |||. :|...|.||.||.:.:        :.|||:|   |
  Fly  1310 TKKPVTRVTTKAPNKKTSAVSTTTRKPATRRTTVAAKVTTTTRRPATKKPTRRVSSTVKTTTVSS 1374

Zfish   204 SIPKPDNLTNPTNSKDIKEKLAPPRAKLPKWA-FEEY------------LTSPAPTVS--GPKS- 252
            :.|..|.:.:..:.:|:...  |...::.:.| ...|            .|.|.|.::  .|.: 
  Fly  1375 ARPADDEIVDEEDEEDVNPN--PSDNEIDQGATLSSYGGANGRKIHSTSRTLPTPNLAFHSPSTE 1437

Zfish   253 ----------RIIGGNSALPGEIPWQVALVSRST-----QQVFCGGSILNPLWVITAAHCLLGNH 302
                      ||:||..:..|..|||| ||..||     .:..|||.::...:|||||||..| .
  Fly  1438 CGVRPHVKSGRIVGGKGSTFGAYPWQV-LVRESTWLGLFTKNKCGGVLITSRYVITAAHCQPG-F 1500

Zfish   303 NGSFYIRVGEHDVSKIEGTEQNV--DVIKLISHPRYNSKVSLFNHDIALLRLRSPIRLTPTVRPI 365
            ..|....:||.|:|....::::|  :|.::|.|.:|:.  :.|.:|:|||.|.||::....:.||
  Fly  1501 LASLVAVMGEFDISGDLESKRSVTKNVKRVIVHRQYDP--ATFENDLALLELDSPVQFDTHIVPI 1563

Zfish   366 CLGPMVFSNTLLQSGTLATVSGWGRVRFQGRSAATLQKIELPYVDRTVCKE------SSSDPITH 424
            |:...|...|    |.:|||:||||:::.|...:.||::::|.::.:||:|      .:...:|.
  Fly  1564 CMPNDVADFT----GRMATVTGWGRLKYGGGVPSVLQEVQVPIIENSVCQEMFHTAGHNKKILTS 1624

Zfish   425 FMFCAGHSDSPKDACQGDSGGPHVM-RYHNTWFLTGIISWGEECAKKGKYGVYTQVGNYYRWIQH 488
            |: |||:::..||:|:||||||.|: |....:.|.|.:|.|.:||.....|||.:...|..|::.
  Fly  1625 FL-CAGYANGQKDSCEGDSGGPLVLQRPDGRYELAGTVSHGIKCAAPYLPGVYMRTTFYKPWLRS 1688

Zfish   489 TMGV 492
            ..||
  Fly  1689 ITGV 1692

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
f9aNP_878288.2 GLA 19..83 CDD:214503
EGF_CA 84..120 CDD:238011