DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp6 and Alp1

DIOPT Version :10

Sequence 1:NP_610496.1 Gene:Alp6 / 35981 FlyBaseID:FBgn0033423 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster


Alignment Length:535 Identity:254/535 - (47%)
Similarity:336/535 - (62%) Gaps:45/535 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARRFI--LLLVLAVCLSGSASGQRDHPRGRSFDAESHPIKYAEEQQTQYWVDKAQAKLLSKLAEQ 64
            |.||.  |.|.|..|     |.|..:...:|:|.:|    .:|.:..::|...||..|.:||   
  Fly     3 ALRFFAALALQLTAC-----SSQYKYGPEQSWDLDS----ISELKSKEFWFHDAQRTLYNKL--- 55

  Fly    65 ESATTN--KAKNVILFLGDGMSVHTVTA-------TRNLLGDSAEQVYFEGFPYTGLSKTYCVNR 120
             |...|  :|||||.||||||||.||||       .|.::|: ..::.||.|.|.|||||||||:
  Fly    56 -STPPNQYRAKNVIFFLGDGMSVPTVTAGRIFDGQLRGVVGE-RNRLEFEKFNYVGLSKTYCVNK 118

  Fly   121 QVADSACTATAYLGGVKANYGTIGVNANVSRYSCDGAANEEDRVLSIAHWAQAAGKDAGLVTTAR 185
            |||||||||:|||.|:||||.||||.|:|....|.|:...::|:.|||.||....|.||||||.|
  Fly   119 QVADSACTASAYLSGIKANYLTIGVTADVELNDCRGSRLPQNRLSSIAAWALKGSKSAGLVTTTR 183

  Fly   186 VTHASPAGVYAHIADRNWENDWEVANRECDPEQTIDIARQLVEQPVGQQLKVILGGGRKNFIDAT 250
            ||||||||||||.::|::|:|::|.....:|....|||:||::..||::|:|::|||...|:..|
  Fly   184 VTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNCPDIAQQLIDGDVGKRLRVVMGGGTIKFLPNT 248

  Fly   251 VNDEEGYPGKRTDGRHLIRSWLDQKKEANVSAKYVWSRKGLSLVDLENTDYLLGLFANDHLPYNG 315
            .||..|..|:|.|.|:||..| .|.|..|  |:.|:||..|...|.:|||:|||||...||.|:.
  Fly   249 TNDVFGNKGQRLDNRNLIEEW-QQTKPGN--ARVVFSRTDLLNNDAQNTDFLLGLFNASHLAYHM 310

  Fly   316 DRDRKRSQLADPSLSELTEAAITVLSRNDKGFFLFVEGARIDMAHHDTFAKRSLEDTAEFARAVQ 380
            |     ..:..|:|.|:|.|||.||||:..|:||||||.|||.|||:|.||::|::|.:|:.||:
  Fly   311 D-----DSIDTPTLPEMTAAAINVLSRDPNGYFLFVEGGRIDHAHHETKAKKALDETVQFSDAVR 370

  Fly   381 KARELTSEDDTLIVVTADHAHVMSINGYPYRDQEITGL-AQLAD-DNLPYTILSYANGPGYYSGY 443
            |||:||:..||||||:|||.|.::|:|||..:..|.|| ::|:: |.||||.:||||||.|...|
  Fly   371 KARQLTNPWDTLIVVSADHGHTVTISGYPDVNNSIVGLNSELSNVDQLPYTSISYANGPAYERFY 435

  Fly   444 NRAEG---RALLKEKLVADSDYQYPTLAPLDAETHGGDDVAVYA-------SGPYAQYFSGNYEQ 498
            ...:|   |..|:....:..|..||...|:..|||||.||||||       .||::..|:|.|||
  Fly   436 KSTDGVVERVDLRNLDFSKPDAIYPHGVPMTEETHGGGDVAVYAHVVEYLLQGPWSHLFTGVYEQ 500

  Fly   499 SNIPALMARAAGIGP 513
            |.:|.||..|:.:||
  Fly   501 STLPHLMGFASCLGP 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp6NP_610496.1 alkPPc 73..512 CDD:214515 230/457 (50%)
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 230/457 (50%)

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