DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp6 and Alp12

DIOPT Version :9

Sequence 1:NP_610496.1 Gene:Alp6 / 35981 FlyBaseID:FBgn0033423 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001188848.1 Gene:Alp12 / 35218 FlyBaseID:FBgn0032779 Length:596 Species:Drosophila melanogaster


Alignment Length:535 Identity:207/535 - (38%)
Similarity:293/535 - (54%) Gaps:48/535 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FILLLVLAVC--------LSGSASGQRDHPRGRSFDAES---HPIKYAEEQQTQYWVDKAQAKLL 58
            |..||:.|:|        :||...           |.|:   .|:...:||:.  |.|:...:|.
  Fly    70 FSALLITAMCIGFVVHYGMSGDVG-----------DMETVSYWPVDLPKEQKE--WYDQGIDELQ 121

  Fly    59 SKLAEQESATTNKAKNVILFLGDGMSVHTVTATRNLLGDSAEQVY-FEGFPYTGLSKTYCVNRQV 122
            ..::.|  ....:|||||||:||||..:||||.| :||...|.:. :|.||..||.||||.::||
  Fly   122 KAVSRQ--FNRRRAKNVILFVGDGMGPNTVTAAR-ILGVKEEGLLRWEQFPDMGLLKTYCADKQV 183

  Fly   123 ADSACTATAYLGGVKANYGTIGVNANVSRYSCDGAANEEDRVLSIAHWAQAAGKDAGLVTTARVT 187
            .||..||||..||||.||.|.||:|||...:|..:..|:..|.:|..|||..|...|.|||.|||
  Fly   184 PDSFSTATALFGGVKVNYETGGVDANVPLGNCSASLKEDHHVQTILKWAQVDGMRTGFVTTTRVT 248

  Fly   188 HASPAGVYAHIADRNWENDWEVANRECDPEQTIDIARQLVEQPVGQQLKVILGGGRKNFI-DAT- 250
            ||:||.:|||:.||.||.:..:. .|...:..:||||||:|||.||.:.||:||||:..: |.| 
  Fly   249 HATPAALYAHVPDRRWECESGMP-AEAQGQGCMDIARQLIEQPTGQSINVIMGGGRQMLVSDVTG 312

  Fly   251 --VNDEEGYPGKRTDGRHLIRSWLDQKKEANVSAKYVWSRKGLSLVDLENTDYLLGLFANDHLPY 313
              .:..:.:.|:..|||.|||.|..:|.:..||...|.:.:.|..::.::.||:||:|||.||.|
  Fly   313 SAADPLDTWAGQSKDGRDLIRDWRLKKADEGVSHAVVQNNRELWNLNGQDVDYVLGIFANGHLMY 377

  Fly   314 NGDRDRKRSQLADPSLSELTEAAITVLSRNDKGFFLFVEGARIDMAHHDTFAKRSLEDTAEFARA 378
              |.:|.||....||||.:|..|:.||..:||||.|.||...||.|||...|:::|.:..|...|
  Fly   378 --DHERDRSDAGMPSLSNMTLKALEVLGNSDKGFLLVVEAGLIDQAHHRGNARKALSEVLELNAA 440

  Fly   379 VQKARELTSE----DDTLIVVTADHAHVMSINGYPYRDQEITGLA-QLADDNLPYTILSYANGPG 438
            |:........    |:||::|||||:|.::|||:|.|...|.||| ....:..|||.|:|...  
  Fly   441 VESTLSFLKSSDRLDETLVIVTADHSHSLTINGHPDRGSSILGLAGNSKTEGTPYTTLTYGTS-- 503

  Fly   439 YYSGYNRAEGRALLKEKLVAD--SDYQYPTLAPL--DAETHGGDDVAVYASGPYAQYFSGNYEQS 499
             |.|: :.:.:...::...||  :.::|...|.:  |...|||.||.::|.|..:..|.|.:|||
  Fly   504 -YQGF-QVDPQTQSRKDPTADDITAWEYTQQAAINTDENLHGGSDVTIHADGAMSYLFHGVHEQS 566

  Fly   500 NIPALMARAAGIGPY 514
            .:...::.|..||.:
  Fly   567 YVAHAISYALRIGRF 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp6NP_610496.1 ALP_like 72..511 CDD:304875 189/452 (42%)
Alp12NP_001188848.1 ALP_like 134..579 CDD:304875 188/452 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466673
Domainoid 1 1.000 141 1.000 Domainoid score I216
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I224
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - otm51319
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
109.900

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