DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp6 and Alpi

DIOPT Version :9

Sequence 1:NP_610496.1 Gene:Alp6 / 35981 FlyBaseID:FBgn0033423 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_073156.3 Gene:Alpi / 24197 RGDID:2099 Length:540 Species:Rattus norvegicus


Alignment Length:526 Identity:220/526 - (41%)
Similarity:287/526 - (54%) Gaps:55/526 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FILLLVLAVCLSGSASGQRDHPRGRSFDAESHPIKYAEEQQTQYWVDKAQAKLLSKLAEQESATT 69
            ::|||:|         |.|.|        .|..:...||:...:|..||:..|  .:|::.....
  Rat     5 WVLLLLL---------GLRIH--------LSFGVIPVEEENPVFWNQKAKEAL--DVAKKLQPIQ 50

  Fly    70 NKAKNVILFLGDGMSVHTVTATRNLLGD------SAEQVYFEGFPYTGLSKTYCVNRQVADSACT 128
            ..|||:||||||||.|.||||||.|.|.      ....:..:.||:|.|||||.|:|||.|||.|
  Rat    51 TSAKNLILFLGDGMGVPTVTATRILKGQLGGHLGPETPLAMDHFPFTALSKTYNVDRQVPDSAGT 115

  Fly   129 ATAYLGGVKANYGTIGVNANVSRYSCDGAANEEDRVLSIAHWAQAAGKDAGLVTTARVTHASPAG 193
            |||||.||||||.||||:|......|:.....|  |.|:.|.|:.|||..|:|||.||.||||||
  Rat   116 ATAYLCGVKANYKTIGVSAAARFNQCNSTFGNE--VFSVMHRAKKAGKSVGVVTTTRVQHASPAG 178

  Fly   194 VYAHIADRNWENDWEVANRECDPEQTIDIARQLVEQPVGQQLKVILGGGRKNFIDATVNDEEGYP 258
            .|||..:|:|.:|.::.:.... |...|||.||:.   ...:.||||||||........|.| ||
  Rat   179 TYAHTVNRDWYSDADMPSSALQ-EGCKDIATQLIS---NMDIDVILGGGRKFMFPKGTPDPE-YP 238

  Fly   259 GK------RTDGRHLIRSWLDQKKEANVSAKYVWSRKGLSLVDLE-NTDYLLGLFANDHLPYNGD 316
            |.      |.|.|:|:..||.:.:    ..:|||:|:.|.....: ....|:|||....:.|   
  Rat   239 GDSDQSGVRLDSRNLVEEWLAKYQ----GTRYVWNREQLMQASQDPAVTRLMGLFEPAEMKY--- 296

  Fly   317 RDRKRSQLADPSLSELTEAAITVLSRNDKGFFLFVEGARIDMAHHDTFAKRSLEDTAEFARAVQK 381
             |..|:..|||||:|:||.|:.:||||.:||:|||||.|||..||...|..:|.:...|..|::|
  Rat   297 -DVNRNASADPSLAEMTEVAVRLLSRNPQGFYLFVEGGRIDQGHHAGTAYLALTEAVMFDSAIEK 360

  Fly   382 ARELTSEDDTLIVVTADHAHVMSINGYPYRDQEITGLAQL-ADDNLPYTILSYANGPGYY--SGY 443
            |.:||:|.|||.::||||:||.:..||..|...|.|||.| |.|...||.:.|.|||||.  || 
  Rat   361 ASQLTNEKDTLTLITADHSHVFAFGGYTLRGTSIFGLAPLNAQDGKSYTSILYGNGPGYVLNSG- 424

  Fly   444 NRAEGRALLKEKLVADSDYQYPTLAPLDAETHGGDDVAVYASGPYAQYFSGNYEQSNIPALMARA 508
                .|..:.:....|.:|:.....||.:|||||:|||::|.||.|....|..||:.|..:||.|
  Rat   425 ----NRPNVTDAESGDVNYKQQAAVPLSSETHGGEDVAIFARGPQAHLVHGVQEQNYIAHVMAFA 485

  Fly   509 AGIGPY 514
            ..:.||
  Rat   486 GCLEPY 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp6NP_610496.1 ALP_like 72..511 CDD:304875 203/454 (45%)
AlpiNP_073156.3 Alk_phosphatase 53..488 CDD:278666 203/454 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351452
Domainoid 1 1.000 373 1.000 Domainoid score I856
eggNOG 1 0.900 - - E1_COG1785
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 387 1.000 Inparanoid score I1947
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm8918
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X159
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.910

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