DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp6 and Alpp

DIOPT Version :9

Sequence 1:NP_610496.1 Gene:Alp6 / 35981 FlyBaseID:FBgn0033423 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_002730104.3 Gene:Alpp / 100359675 RGDID:2325055 Length:529 Species:Rattus norvegicus


Alignment Length:489 Identity:207/489 - (42%)
Similarity:275/489 - (56%) Gaps:38/489 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EEQQTQYWVDKAQAKLLSKLAEQESATTNKAKNVILFLGDGMSVHTVTATRNLLGDS------AE 100
            ||:...:|..||...|  :.|::.......|.|:|:.:||||.|.||||||.|.|..      ..
  Rat    23 EEENPAFWNRKAAEAL--EAAKKLQPIQTSANNLIILMGDGMGVSTVTATRILKGQQQGHLGPET 85

  Fly   101 QVYFEGFPYTGLSKTYCVNRQVADSACTATAYLGGVKANYGTIGVNANVSRYSCDGAANEEDRVL 165
            .:..:.||:..|||||..::||.|||.|.||:|.|||.|...||::|......|:.....|  |:
  Rat    86 PLAMDRFPHMALSKTYNTDKQVPDSAGTGTAFLCGVKTNMKVIGLSAAARFNQCNTTWGNE--VV 148

  Fly   166 SIAHWAQAAGKDAGLVTTARVTHASPAGVYAHIADRNWENDWEVANRECDPEQTIDIARQLVEQP 230
            |:.|.|:.|||..|:|||..|.||||||.|||..:|||.:|..::..... |...|||.||:.  
  Rat   149 SVMHRAKKAGKSVGVVTTTSVQHASPAGTYAHTVNRNWYSDAHMSTAALQ-EGCKDIAMQLIS-- 210

  Fly   231 VGQQLKVILGGGRKNFIDATVNDEEGYP------GKRTDGRHLIRSWLDQKKEANVSAKYVWSRK 289
             ...:.||||||||........|:| ||      |.|.|||:|::.||.:.:    .|:|||:|.
  Rat   211 -NTDIDVILGGGRKFMFPKGTPDQE-YPTDPQQAGTRLDGRNLVQEWLAKHQ----GAQYVWNRT 269

  Fly   290 GLSLVDL-ENTDYLLGLFANDHLPYNGDRDRKRSQLADPSLSELTEAAITVLSRNDKGFFLFVEG 353
            .|....| .:..:|:|||..:.:.||.|||..:    ||||:|:||.|:.:||||.|||:|||||
  Rat   270 ELIQASLNRSVTHLMGLFEPNDMKYNIDRDPTQ----DPSLAEMTEVAVHMLSRNPKGFYLFVEG 330

  Fly   354 ARIDMAHHDTFAKRSLEDTAEFARAVQKARELTSEDDTLIVVTADHAHVMSINGYPYRDQEITGL 418
            .|||..||:..|.|:|.:...|..||.||.:||||.||:|:|||||:||.|..||..|:..|.||
  Rat   331 GRIDHGHHEAIAYRALTEAVMFDSAVDKADKLTSEKDTMIIVTADHSHVFSFGGYTQREASIFGL 395

  Fly   419 AQL-ADDNLPYTILSYANGPGY--YSGYNRAEGRALLKEKLVADSDYQYPTLAPLDAETHGGDDV 480
            |.. |.|...:|.:.|.|||||  .:|.     ||.:.|:..::..||.....||.:|||.|:||
  Rat   396 APFKAGDGKSFTSILYGNGPGYKLNNGI-----RADVTEEESSNPTYQQQAAVPLSSETHSGEDV 455

  Fly   481 AVYASGPYAQYFSGNYEQSNIPALMARAAGIGPY 514
            |::|.||.|....|..||:.|..:||.|..:.||
  Rat   456 AIFARGPQAHLVHGVQEQNYIAHVMAFAGCLEPY 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp6NP_610496.1 ALP_like 72..511 CDD:304875 198/454 (44%)
AlppXP_002730104.3 Alk_phosphatase 51..486 CDD:395188 198/454 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351439
Domainoid 1 1.000 373 1.000 Domainoid score I856
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 387 1.000 Inparanoid score I1947
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm8918
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X159
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.010

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